Query= MSMg01no338_h21.b1 MSMg01no338_h21.b1 CHROMAT_FILE:
MSMg01no338_h21.b1 PHD_FILE: MSMg01no338_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:08 2005
(498 letters)
>mm_chr2_69147380_69148277
Length = 898
Score = 758 bits (392), Expect = 0.0
Identities = 476/518 (91%), Gaps = 25/518 (4%)
Strand = Plus / Plus
Query: 5 gaattcctttcatccttacttt--taaaaataggcatacttacttttgtggatatatttc 62
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 182 gaattcctttcatccttactttaaaaaaaataggcatacttacttttgtggacatatttc 241
Query: 63 tt---------------------atagtaagcaag-ctctattgctatagttacaatgga 100
|| ||||||||| || |||| |||||| ||||||||||||
Sbjct: 242 ttagtaatgtctaacctccatcaatagtaagc-agtctctgttgctacagttacaatgga 300
Query: 101 tgttgacatttggtagcttattttattttcaatgaatttagttctgctcttttgcctttc 160
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 ttttgacatttggtagcttattttgttttcaatgaatttagttctgctcttttgcctttc 360
Query: 161 aatacaaattttaaaggactcttgctaatactgtaattaaagtaagtgttcaacaattcc 220
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 361 aatacaaattttaaaggaatcttgctaatactgtaattaaagtaagtgtccaacaattcc 420
Query: 221 tcagtgaagaaaatacagcatatgtgatggtttgtataagctcggtccagagagtggcac 280
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcagtgaagaaaatacagcgtatgtgatggtttgtataagctcggtccagagagtggcac 480
Query: 281 tattagtaggtgtggccatgttggagtaggtgtgtcactgtgggcctgggctttaagatc 340
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagtagtaggtgtggccttgttggagtaggtgtgtcactgtgggcctgggctttaagatc 540
Query: 341 tcatcctaactgcctggaagccagtctatcactagcagccttcagatgaagcctaaaact 400
||||||||||||||||||||||||||| |||||| ||| |||||||||||||||| ||||
Sbjct: 541 tcatcctaactgcctggaagccagtctttcactatcagtcttcagatgaagcctagaact 600
Query: 401 ctcagctcttcctgcgtcatgcttgcttggatgctgccatgttcctgccttgatgatgat 460
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcagctcttcctgtgccatgcttgcttggatgctgccatgttcctgccttgatgatgat 660
Query: 461 ggactgaacctctgaacctgtaagctagccccaattaa 498
||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggactgaacctctgaacctgtaagctagccccaattaa 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_h21.g1 MSMg01no338_h21.g1 CHROMAT_FILE:
MSMg01no338_h21.g1 PHD_FILE: MSMg01no338_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:08 2005
(515 letters)
>mm_chr2_69312789_69313703
Length = 915
Score = 789 bits (408), Expect = 0.0
Identities = 420/424 (99%)
Strand = Plus / Minus
Query: 1 tgtagtaggtgacaggaactcagttgctcatttctgacaatggtgtggcagccaatcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgtagtaggtgacaggaactcagttgctcatttctgacaatggtgtggcagccaatcacc 368
Query: 61 ctaggagctgtgatggggttaggtagttgtggtattcatcagtgagttcattactgagta 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctaggagctgtgatggggttgggtagttgtggtattcatcagtgagttcattactgagta 308
Query: 121 ccactgtttcctcttttttcaaacaacgtattttgatcatattctttccccttcagctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccactgtttcctcttttttcaaacaacgtattttgatcatattctttccccttcagctcc 248
Query: 181 tccccattccaacccacccttaacgaagatgctatgtacaatggatactctaatggagtg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 247 tccccattccaacccacccttaacgaagatgctatgtgcaatggatactctaatggagtg 188
Query: 241 tgagcggctatatcagtattccacggcaggctccatgcccgagagtagtcagccaataca 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgagcggctatgtcagtattccacggcaggctccatgcccgagagtagtcagccaataca 128
Query: 301 aatgaactcaatggaatttttgtgggcttttgtttcattttgcttggttgggactttttg 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 127 aatgaactcaatggaatttttgtgggtttttgtttcattttgcttggttgggactttttg 68
Query: 361 tcttggccttttgtctattgactctttaaattttttgtttcttgtctttttttttttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tcttggccttttgtctattgactctttaaattttttgtttcttgtctttttttttttttt 8
Query: 421 tttt 424
||||
Sbjct: 7 tttt 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
