Query= MSMg01no339_g21.b1 MSMg01no339_g21.b1 CHROMAT_FILE:
MSMg01no339_g21.b1 PHD_FILE: MSMg01no339_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:15 2005
(449 letters)
>mm_chr2_145234065_145234913
Length = 849
Score = 806 bits (417), Expect = 0.0
Identities = 441/449 (98%)
Strand = Plus / Minus
Query: 1 cattgctatggtcagttgtgctgttttgatccttccaggaggacaataaagtgagggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 cattgctatggtcagttgtgctgttttgatccttccaggaggacaataaagtgagggagg 590
Query: 61 atgaatctcccagaaatataagtacatgactaatgaatccaactcctcatggaatttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 atgaatctcccagaaatataagtacatgactaatgaatccaactcctcatggaatttagt 530
Query: 121 aaccaaagggaaacaactaagacaccaattaatttacatactttcaattttacaagacca 180
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 529 aactaaagggaaacaactaagacaccaattaatttacatattttcaattttacaagacca 470
Query: 181 ccacatgtagaatggctttcccaattgaatgtgatgagagatatacagaacacatagaat 240
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 469 ccacatgtagaatggctttcccaattgaatgtgataagagatagacagaacacatagaat 410
Query: 241 attctagggtcttctgcgagaagaatcttagaggcaaaacatactactacttgtctgaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 attctagggtcttctgcgagaagaatcttagaggcaaaacatactactacttgtctgaca 350
Query: 301 aaggcacagaaccatgtctcaggcaggaaataagacactatagttcttacttactgttac 360
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 349 aaggcacagaaccatgtctcaggcaggaagtaagacattatagttcttacttactgttac 290
Query: 361 tgaaatagtggatctcaaattgaacaccttttccttcaaaacaaaaactgaaatctggga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 289 tgaaatagtggatctcaaattgaacaccttttccttcaaaacaaaaactgaaatttggga 230
Query: 421 tgctgcatgtcctgtgatgctaacataga 449
|||||||||||||||||||||||| ||||
Sbjct: 229 tgctgcatgtcctgtgatgctaacgtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_g21.g1 MSMg01no339_g21.g1 CHROMAT_FILE:
MSMg01no339_g21.g1 PHD_FILE: MSMg01no339_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:15 2005
(390 letters)
>mm_chr2_145047009_145047794
Length = 786
Score = 642 bits (332), Expect = 0.0
Identities = 372/386 (96%), Gaps = 4/386 (1%)
Strand = Plus / Plus
Query: 1 tattcctctaccaagccttcctcaggtttgaacttctgatgactaatctggcatcatggt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattcctctaccaaaccttcctcaggtttgaacttctgatgactaatctggcatcatggt 260
Query: 61 gagaactcaatttggggaaaaagttatttgggtctttttcttcttctcattctttttttt 120
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 261 gagaactcaatttggggaaaaagtcatttgggtctttttcttcttctcattc-ttttttt 319
Query: 121 tttttaatttaagcatcattttcaaaaataggtttttaaagagaaattttacaacaagtg 180
|||||||| ||||| |||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 320 tttttaatgtaagcctcattttcaaaaataggtttttaaagagaagttttagaacaagtg 379
Query: 181 tggtgagcctcagagctgggctttcccattcaaagatgcttatgaccatagacagaactg 240
||||||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||
Sbjct: 380 tggtgagcctcggagctgggctttcccattcgaagatgtttatgaccatggacagaactg 439
Query: 241 tttttaaaaattcatagtctgagctgaacaacagtttccttaattgagcctcccctgagc 300
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 440 tttttaaaaattcatagtctgagctgaacaa--gtttccttaattgagcctcccctgagc 497
Query: 301 tacagctgagagaaataggcaaggcaattgattctggggtagccagggggcccattggat 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 tacagctgagagaaataggcaaggcaattgattctggggtagccagggg-cccattggat 556
Query: 361 gcttgtacttctctgtcctgtctact 386
||||||||||||||||||||||||||
Sbjct: 557 gcttgtacttctctgtcctgtctact 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 786
Length adjustment: 9
Effective length of query: 381
Effective length of database: 777
Effective search space: 296037
Effective search space used: 296037
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
