Query= MSMg01no339_o07.b1 MSMg01no339_o07.b1 CHROMAT_FILE:
MSMg01no339_o07.b1 PHD_FILE: MSMg01no339_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:50 2005
(523 letters)
>mm_chr2_79735640_79736561
Length = 922
Score = 922 bits (477), Expect = 0.0
Identities = 480/481 (99%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 43 agacagagagacagatacagagacaaagacacagagacagagagagacagagagactgac 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 agacagagagacagatacagagacaaagacacagagacagagagagacagagagactgac 863
Query: 103 ataaagagagagaaatttgtatatgtatataaagccctgacatggcattatgagacaagg 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 ataaagagagagaaatttgtatatgtatataaagccctgacatggcattatgagacaagg 803
Query: 163 agcctccaatgtgctgttggagtacatttttcttttttgttgtccgggcatgcagcatac 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 agcctccaatgtgctgttggagtacatttttcttttttgttgtccgggcatgcagcatac 743
Query: 223 tctcttgaagagtagtgtgtttctacattcttttccatgtaaattctttattcttacaaa 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tctcttgaagagtagtgtgtttctacattcttttccatgtaaattctttattcttacaaa 683
Query: 283 aaaaaaaacccaaaaattaaaataagtaaaataattgacatagagaaaaagccttgtgtc 342
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaaaaaa-cccaaaaattaaaataagtaaaataattgacatagagaaaaagccttgtgtc 624
Query: 343 ttcagaatatgttaaggataaatactcactctctagctcacctaacttcaggattgtttg 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttcagaatatgttaaggataaatactcactctctagctcacctaacttcaggattgtttg 564
Query: 403 tctgtgcttacaatactacaaatcacagacatgtccttacagaagattggggggaattat 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tctgtgcttacaatactacaaatcacagacatgtccttacagaagattggggggaattat 504
Query: 463 gcagataaacacagagacagagcattcctttctgatttttgcaccacagtgaatgaatga 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcagataaacacagagacagagcattcctttctgatttttgcaccacagtgaatgaatga 444
Query: 523 a 523
|
Sbjct: 443 a 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 922
Length adjustment: 10
Effective length of query: 513
Effective length of database: 912
Effective search space: 467856
Effective search space used: 467856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_o07.g1 MSMg01no339_o07.g1 CHROMAT_FILE:
MSMg01no339_o07.g1 PHD_FILE: MSMg01no339_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:50 2005
(544 letters)
>mm_chr2_79578581_79579524
Length = 944
Score = 617 bits (319), Expect = 0.0
Identities = 352/363 (96%)
Strand = Plus / Plus
Query: 182 ggaatcagggtctctactgattcttttcacaagtagcataccctctttataggttaagtt 241
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 382 ggaatcagtgtctctactgattcttttcacaagtagcataccctctttataggtaaagtt 441
Query: 242 atttcctgttattttatgcttccattggtagagaaaaatttaaaattccgtgaatagaca 301
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 442 atttcctgttattttatgcttccattgctagagaaaaatttaaaattccgtgaatagaca 501
Query: 302 gatctttgtctgttttgttcaccagtacatctcaatggcctacaagactttttggcacaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 502 gatctttgtctgttttgttcaccagtacatctcaatggcctacaagactttatggcacaa 561
Query: 362 taagatccctaccaaaatgcctttgtaaaagttaaataagttcatgactgctatactcca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 taagatccctaccaaaatgcctttgtaaaagttaaataagttcatgactgctatactcca 621
Query: 422 tgtctctacttcctgcagagcagtatgtagttaacctgaatattgggtgggctcagaact 481
|||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 622 tgtctctacttcctgcagagcagtatgtagttaatctgaatactggttgggctcagaact 681
Query: 482 tggatgccaggtatggcttttgactcaagggcttcctcaccaattactgttaacagttgt 541
|||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 682 tggatgccagccatggcttctgactcaagggcttcctcaccaattactcttaacagttgt 741
Query: 542 gca 544
|||
Sbjct: 742 gca 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
