Query= MSMg01no340_d20.b1 MSMg01no340_d20.b1 CHROMAT_FILE:
MSMg01no340_d20.b1 PHD_FILE: MSMg01no340_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:14 2005
(646 letters)
>mm_chr2_125507110_125508156
Length = 1047
Score = 1220 bits (631), Expect = 0.0
Identities = 640/643 (99%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatagagtattataagaaatggaagaccgcctgcttcccgggagccaatgagag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatagagtattataagaaatggaagaccgcctgcttcccgggagccaatgagag 264
Query: 65 tgctgggtaagtggttcgaaataacaatagaaacagtgatggatgttgatgctgctacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgctgggtaagtggttcgaaataacaatagaaacagtgatggatgttgatgctgctacat 324
Query: 125 acagtaattgcttattaatgttagaagtcactgcctttatatattactttgtagtttcac 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 325 acagtaattgcttattaatgttagaagtcactgcctttatatattattttgtagtttcac 384
Query: 185 aaagtgctttcccaaacactctgattctcatgcatattctagtatattctagggagatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaagtgctttcccaaacactctgattctcatgcatattctagtatattctagggagatta 444
Query: 245 gcattgtgaatctgacttgaagggaatggtccctctcacaaggtgaaccatgctggcaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcattgtgaatctgacttgaagggaatggtccctctcacaaggtgaaccatgctggcaga 504
Query: 305 gtgggcaccgcaatgacagacatagaagccggagcagagacaagaagtactggatgcaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgggcaccgcaatgacagacatagaagccggagcagagacaagaagtactggatgcaga 564
Query: 365 gagctcacatgtgcgacagcccgctgtgggaaaaagcagtgaacagctgagacagattag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagctcacatgtgcgacagcccgctgtgggaaaaagcagtgaacagctgagacagattag 624
Query: 425 cagttcaaaacgctttgcaaaaggccagatagcaaatgtgttactgtttagttccaatga 484
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagttcaaaacgctttgcgaaaggccagatagcaaatgtgttactgtttagttccaatga 684
Query: 485 aaagcagcctgagacaatatataaacaagtgaactcgtctgcgtgccaataacattttat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaagcagcctgagacaatatataaacaagtgaactcgtctgcgtgccaataacattttat 744
Query: 545 ttttaggaatatgagctggacagagctggctgatgggccgtaatagccatcccctgaatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttttaggaatatgagctggacagagctggctgatgggccgtaatagccatcccctgaatt 804
Query: 605 aa-ccacttatacaacatcagaaaagtttagtctttaaaaaca 646
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaaccacttatacaacatcagaaaagtttagtctttaaaaaca 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space: 659532
Effective search space used: 659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_d20.g1 MSMg01no340_d20.g1 CHROMAT_FILE:
MSMg01no340_d20.g1 PHD_FILE: MSMg01no340_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:14 2005
(557 letters)
>mm_chr2_125679324_125680280
Length = 957
Score = 1058 bits (547), Expect = 0.0
Identities = 554/557 (99%)
Strand = Plus / Minus
Query: 1 aaggacagctaggactttgtagagagaccctgtctcaaaaaaagttgttcatggtggagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaggacagctaggactttgtagagagaccctgtctcaaaaaaagttgttcatggtggaga 507
Query: 61 caaaaggagtgaggggacagtatagacactaagccctacatttgatgcatgtcatgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 caaaaggagtgaggggacagtatagacactaagccctacatttgatgcatgtcatgtaga 447
Query: 121 gagaagcatgactgtagatttggttctgctaaaaagagctgggggatcaagaaggaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagaagcatgactgtagatttggttctgctaaaaagagctgggggatcaagaaggaaaag 387
Query: 181 ccttggtaaatacatttaccaaagtgtgacactggggagctgcaaaggagaaaaggaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccttggtaaatacatttaccaaagtgtgacactggggagctgcaaaggagaaaaggaagg 327
Query: 241 agaagggattgtgtagaattcctaaccagggtattattcgctgctgctagtgtagttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agaagggattgtgtagaattcctaaccagggtattattcgctgctgctagtgtagttaga 267
Query: 301 ggcataggcaggcctctaactacaggctaagacggaggcaggattgcatgctcacaccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggcataggcaggcctctaactacaggctaagacggaggcaggattgcatgctcacaccca 207
Query: 361 acttaggcaacttaataagaccctttctcaaaaaataaatagctggatgaaattactggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 acttaggcaacttaataagaccctttctcaaaaaataaatagctggatgaaattactggt 147
Query: 421 agtggaacatttgtctaaaatgcataaggcctgagttcattctcctccagcatggccaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agtggaacatttgtctaaaatgcataaggcctgagttcattctcctccagcatggccaag 87
Query: 481 ataaaattatgatttgtattanagcagcaacttanaattatatggcatatttggggggaa 540
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 86 ataaaattatgatttgtattaaagcagcaacttaaaattatatggcatatttggggggaa 27
Query: 541 agagaatagatttagat 557
|||||||||||||||||
Sbjct: 26 agagaatagatttagat 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
