NNNATCAAATTGCGGCGCTATACGACTACTATATTCGAGGACCGCGGATT
CTCGGTTCCTCTCCAGCACCGTGTCTGCCTGTGTGCTGCCATGCTTTCCC
ACGGTGACGATAATGGGACTAAAACCTTCCGAAAATTGTTAAAACCCCCC
CCCCCCCATGGGGAAAAGGGGGGTTCCCCCCCCTTTTTTTAAAAAAAAAT
TNTTTTATACNCGTGGGTGCGCTAGCAGGGGGGGTTCTTTTCTTCTCTCC
CCTNCCACAGANNTCAAAGTAAAAAAAAATTAGTNATTTTTTTNTTTCAC
TCCTTTTTTCCCCACCCAATTTNNNCTTTTTTTNTCTTTNNNNATTAGAA
TTTTTTTTTATTAATTTTTTTTTTTTTCTTCCTACAAAAAAAAAAAGAAA
AAAATTTTTTTTGGGGGGGCTCCCCCCCCCTTTTTTTAGGTAGAGAAAAA
AAAAAAAANCCCCCCACCCCCCCCCCCCCCCCCTCGGGGGGGGGTTTTTT
TTTTTTTTAAATAGAGGGGGAGGAAAAAACCCCCCCCCCCCCCCGGGAGG
GTGGAGTAACGNNNTCTGGTTNNAGAACCNN

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATCTTTAAAAACTAGCCAAGAGCCGG
GTGGTGGTGGCGCATGCCTTTAATCCCAGCACTGGGAGGCAGAGGCAGGC
GGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACA
GCCAAGACTATACAGAGAAACCCTGTCTCAAAAAAACAAAAAACAAAAAA
CAAAACAAAAAAAAACTAGCCAAGAGTGGGGCGTGGTGGTGCATGCCTTT
TAATCCCAGCACTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCC
AGCCTGGTCTACAGAGTGAGTTCTAGGACAGTTGGGGCTGCACAGAGAAA
CCCTGACTTTCGGGGGGGGGGGGGGGAAGACTAGCCAAGAGCTTTGCCAA
CTGTCTCCTTCACTGAGTATCGCTGAGGAATTTTTCTCTATGCTCCACTA
CTGAAATTTCCTAGAAATCAACTCTACTGGTGCCTAGGATAAGTATGAAG
GAGATGGTTAAGCTCCGTTCATAGCACCCTTGTGTTTACTACAATCACTG
TGAATTCCATCTCCAGGGGATCTGACCTGCGGGCAGCCACACTCACCTTC
ACATAGACACCTATACTTAATTCTAACCACTGCAAAATATATGGCCTCTT
TTATGCAAAAGGGTAAAAATAAAAACCCCAGCTTATTTC

Query= MSMg01no340_f03.g1 MSMg01no340_f03.g1 CHROMAT_FILE:
MSMg01no340_f03.g1 PHD_FILE: MSMg01no340_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:19 2005
         (550 letters)



>mm_chr2_144085577_144086526
          Length = 950

 Score =  984 bits (509), Expect = 0.0
 Identities = 544/561 (96%), Gaps = 12/561 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctttaaaaactagccaagagccgggtggtggtggcgcatgcctttaatcccagcactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atctttaaaaactagccaagagccgggtggtggtggcgcatgcctttaatcccagcactg 250

                                                                       
Query: 61  ggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaaagtgagttcc 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggaggcagagacaggcggatttctgagttcgaggccagcctggtctacaaagtgagttcc 310

                                                                       
Query: 121 aggacagccaagactatacagagaaaccctgtctcaaaaaaac---------aaaaaaca 171
           |||||||||||||||||||||||||||||||||||||||||||         |||||| |
Sbjct: 311 aggacagccaagactatacagagaaaccctgtctcaaaaaaaccaaaaaccaaaaaaaaa 370

                                                                       
Query: 172 aaaaacaaaacaaaaaaaaactagccaagagtggggcgtggtggtgcatgccttttaatc 231
           ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aaaaaaaaaaaaaaaaaaaactagccaagagtggggcgtggtggtgcatgccttttaatc 430

                                                                       
Query: 232 ccagcactgggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaga 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccagcactgggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaga 490

                                                                       
Query: 292 gtgagttctaggacagttggggctgcacagagaaaccctgactttc-gggggg-gggggg 349
           |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 491 gtgagttctaggacagttggggctgcacagagaaaccctgactttctggggggtgggggg 550

                                                                       
Query: 350 gggaagactagccaagagctttgccaactgtctccttcactgagtatcgctgaggaattt 409
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggg-agactagccaagagctttgccaactgtctccttcactgagtatcgctgaggaattt 609

                                                                       
Query: 410 ttctctatgctccactactgaaatttcctagaaatcaactctactggtgcctaggataag 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttctctatgctccactactgaaatttcctagaaatcaactctactggtgcctaggataag 669

                                                                       
Query: 470 tatgaaggagatggttaagctccgttcatagcacccttgtgtttactacaatcactgtga 529
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 670 tatgaaggagatggttaagctccgttcatagcacccttgtgcttactacaatcactgtga 729

                                
Query: 530 attccatctccaggggatctg 550
           |||||||||||||||||||||
Sbjct: 730 attccatctccaggggatctg 750


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)