NAACAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCATACGATCCGC
GGAATTCTTGTCCTGGTCAGCATATGAATCTGACAGATGGCGTTGTCTAA
TAATGGAGAATATCTAACAGCAAGAAGAAATTGGACCTCCTCTAAATAGC
TCAAGTGAGTAAATAAAAAACCTAGGTTCCTTACAAACGTCTGGATTTTC
TGTCCCATTAACATTAACTTTCACTGGTTTTAAATAATGCAGCATTCTTT
CTATTTTTCCAAGGCCTGTCAAGATATTTGTTCTTTAGAAACATGGACAA
TAGTAAGCATTTCGTTTTCATGGGTAGTAGAGCCTTACATGAAAAAATTT
AAAGATAGTTATGAATATTGGCTACATGATAACATCTTTACACTGAAATA
TTTTCCCAAATAAGTTTCCTCAGTTCCACAACTAGCAGGTTATGAAACTC
CCCAGTACTCCTGCCAGCACATATAAAACTTTCTGGAGATCTTACAATAG
AATAAAATATAATACAATGCTGTGGGATGCTGGACAGCTCAATTCCCTTC
TGGAGAGTTCAATCCTAGACAGTCCAGTGCCTGTCTTCCAGGCAGTGGAG
CTATAAAGAAGACACCTCTGCAGAGCTGTAGGTCTGGAGTCATGGCCTGG
GCCTCATTTCATCGTCCATTGCTCCCCCAATGAAGGCTGCTGACTGCACC
AGCTAGGCAGCAGTCCTAAAGACCTC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCCAAGTCAAATTCTACATGG
GCGTCATGGCATGCATATGCTCACACACCTGCCAGGCCAGGCTCATTGTT
GCAGCTCACAGGGGCACAGCAGTGTAAGCAATCATCGCTACAAGCCTTCC
TCTCACGACTGTCTGGGAAGTATGACAAAGGTTATCGTAAATTATGTTTT
CCTTTTCATTGGATGCTAAAACATTTTTTTTAACTTCCTCCCTGATCTTC
TCAGTAACTCATCAGTGATTTAAAAGTGTACAGTTCTATCTCCACGTATT
TGTGTAGCCTCTGTGGTTTCTCTTGCAGTTGGTTTTTTAAGTTTCTTGCT
GTGTGCTCTGATGAGCTATCAAAGGTTGTTTCGATTCGTGTGCATTTGGT
AAGACTATGGTTGTGGCCTAGCATATCTTAGAGGAGGCTCCTTAGGGTGC
TAAGAAGATTTATTTATTTATTTGTATTTATTTTTGCTTCTTGTTCTTTT
GCTGAAAATAAATGGTTTATCCAGTGTAATATATTGTTGGGAACAAAATA
AAAAAGCGGGGCCTGGGGCCCTGGGGAAGAACTGAAGGAAAAAGATGCCC
ACACTCCGCCAGAGTTTCCCTATTCTCTGGTCAGTCAGGCGTGGGAGGGC
TGCTATCTACCCTATCCACTCATCCCTCGGTGG

Query= MSMg01no340_f19.b1 MSMg01no340_f19.b1 CHROMAT_FILE:
MSMg01no340_f19.b1 PHD_FILE: MSMg01no340_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:22 2005
         (682 letters)



>mm_chr2_135322294_135323375
          Length = 1082

 Score = 1243 bits (643), Expect = 0.0
 Identities = 667/675 (98%)
 Strand = Plus / Minus

                                                                       
Query: 8   gaattcttgtcctggtcagcatatgaatctgacagatggcgttgtctaataatggagaat 67
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 882 gaattcttgtcctggtgagcatatgaatctgacagatggcgttgtctaataatgaagaat 823

                                                                       
Query: 68  atctaacagcaagaagaaattggacctcctctaaatagctcaagtgagtaaataaaaaac 127
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 atctaacagcaagaagaaactggacctcctctaaatagctcaagtgagtaaataaaaaac 763

                                                                       
Query: 128 ctaggttccttacaaacgtctggattttctgtcccattaacattaactttcactggtttt 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ctaggttccttacaaacgtctggattttctgtcccattaacattaactttcactggtttt 703

                                                                       
Query: 188 aaataatgcagcattctttctatttttccaaggcctgtcaagatatttgttctttagaaa 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaataatgcagcattctttctatttttccaaggcctgtcaagatatttgttctttagaaa 643

                                                                       
Query: 248 catggacaatagtaagcatttcgttttcatgggtagtagagccttacatgaaaaaattta 307
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 642 catggacaatagtaagcatttcgtttccatgggtagtagagccttacatgaaaaaattta 583

                                                                       
Query: 308 aagatagttatgaatattggctacatgataacatctttacactgaaatattttcccaaat 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aagatagttatgaatattggctacatgataacatctttacactgaaatattttcccaaat 523

                                                                       
Query: 368 aagtttcctcagttccacaactagcaggttatgaaactccccagtactcctgccagcaca 427
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aagttttctcagttccacaactagcaggttatgaaactccccagtactcctgccagcaca 463

                                                                       
Query: 428 tataaaactttctggagatcttacaatagaataaaatataatacaatgctgtgggatgct 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tataaaactttctggagatcttacaatagaataaaatataatacaatgctgtgggatgct 403

                                                                       
Query: 488 ggacagctcaattcccttctggagagttcaatcctagacagtccagtgcctgtcttccag 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggacagctcaattcccttctggagagttcaatcctagacagtccagtgcctgtcttccag 343

                                                                       
Query: 548 gcagtggagctataaagaagacacctctgcagagctgtaggtctggagtcatggcctggg 607
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 342 gcagtggagctataaagaagacacctctgcagagctgtaggcctggagtcatggcctggg 283

                                                                       
Query: 608 cctcatttcatcgtccattgctcccccaatgaaggctgctgactgcaccagctaggcagc 667
           |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 282 cctcgtttcatcgtccattgctctcccaatgaaggctgctgactgcaccagctaggcagc 223

                          
Query: 668 agtcctaaagacctc 682
           |||||||||||||||
Sbjct: 222 agtcctaaagacctc 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)