TGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCAAATTACCTTGAAAACAGACTCTCATGTACCTTGAGGTTGG
GAGAACTTCCTGGTTCTTTCACTAGTCAGAAGGACCCAGAGCTGAAAGAG
CTGAATTTCCCTCTGCTTTCAATGGCTGTAGGTCAGATGCATAAAAAGGG
TCCCTGTGTGCTAAGGGATCTGTGGCTCAAAGAGTGTGGAACACTGACAT
AACACCCTCTGCCCAGTGCTTTCCTTGCTTTGGTCTTTCCTCATCTTGGC
TATTGTTCCTTACCTTGATGCACTCTATGGCTAGGGGGCAGAGACTCAGA
GATGGTCAGGCTCTCCTGAGAGTACAGGAGGTGGTACTTTTGCACCAACT
ACGTTTAAACCATGTGATCTGCACACTCTCAGAAGCCTTCACACCCGTGT
TTCTTCTCTTATCTTGTCAGCTTGGGTGCTGTTTCTTTATTCCTCACCCC
TTCCTGGCAGGGTCCTCAAAATGAAGGTTTGATAAACAGCAAGGTCTTAA
ACTAAAACCTGGGGTAGAAAAAATGATGATGATTATGGAAAAATGTCATA
TATTTACAATTATTAAGGTTTTTTATCAGACGTCTGGCGTGGTGACCACG
ATCAATTGGCACATCCAATGTGCCCCTTGGACCTCCCCTTTGGTTCGAAC
ATACCCCACTTTCCACCN

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGGGAGAATTTTTGGGGTCAG
TTATGTATATGATCATATTGTCTGTGAATAGCAGAATTTTTAACTTCTTC
CTTTCCAATTTGTATTCCCTTGATCTCCTTTAATTGTCTTATTGCTCTGG
CTAGAACTTCAAGTACTATATTAAATAGATAGGGAGAGAGTGGGCAGCCT
TGTCTTGTCCCTGATTTTAGTGAAATGCTTTCAGTTTCTCTCCATTTAAT
TTGATGTTCAATATTGGCTTGCTGTATATTGCTTTTATTATGTTTAGGTA
TGTGCCCTGGTCCCTTATCTCTCTAATACTTTAAACATGAAGTGATGCTA
GATTTTGTCTAAGGTATTTCAGCATCTAATGATATGAGCATGTGATTTTT
TTTTCAGGTTGTTTATGTGATTGATTACATTGATCGCACTCCCTATATTG
TCCCACTCTCAACTTCGTGGAACGATGTCCACTTCCCCCTCCCCGTTTCC
TGTCTTTTCATGTTGTTCGGCCCGCTCCTCTGCCCCTTACTTCCTCGTTT
TTTCTCTTAGTGTCGTATCCCCTGTTGCTTAGTGTCCGCGCCCTCTTCTT
TTTCCATCTTTTCAATCCCTTTTATTGCCACATTTCGTATTCCCTCTCCC
TTCTCTCCCCATCTTCTCTTACTTATTTCGCCACCGTTTCTTCCCTTT

Query= MSMg01no341_c04.b1 MSMg01no341_c04.b1 CHROMAT_FILE:
MSMg01no341_c04.b1 PHD_FILE: MSMg01no341_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:18 2005
         (461 letters)



>mm_chr2_106311586_106312446
          Length = 861

 Score =  814 bits (421), Expect = 0.0
 Identities = 448/457 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcaaattaccttgaaaacagactctcatgtaccttgaggttgggagaacttcct 64
           |||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 661 gaattctcaaaagacattgaaaacagactgtcatgtaccttgaggttgggagaacttcct 602

                                                                       
Query: 65  ggttctttcactagtcagaaggacccagagctgaaagagctgaatttccctctgctttca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 ggttctttcactagtcagaaggacccagagctgaaagagctgaatttccctttgctttca 542

                                                                       
Query: 125 atggctgtaggtcagatgcataaaaagggtccctgtgtgctaagggatctgtggctcaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atggctgtaggtcagatgcataaaaagggtccctgtgtgctaagggatctgtggctcaaa 482

                                                                       
Query: 185 gagtgtggaacactgacataacaccctctgcccagtgctttccttgctttggtctttcct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagtgtggaacactgacataacaccctctgcccagtgctttccttgctttggtctttcct 422

                                                                       
Query: 245 catcttggctattgttccttaccttgatgcactctatggctagggggcagagactcagag 304
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catcttggctattgttccttgccttgatgcactctatggctagggggcagagactcagag 362

                                                                       
Query: 305 atggtcaggctctcctgagagtacaggaggtggtacttttgcaccaactacgtttaaacc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 atggtcaggctctcctgagagtacaggaggtggtacttttgcaccaactacatttaaacc 302

                                                                       
Query: 365 atgtgatctgcacactctcagaagccttcacacccgtgtttcttctcttatcttgtcagc 424
           ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 301 atgtgatctgcacactctcagaagcctgcacacctgtgtttcttctcttatcttgtcagc 242

                                                
Query: 425 ttgggtgctgtttctttattcctcaccccttcctggc 461
           |||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgggtgctgtttctttattcctcaccccttcctggc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space:   383801
Effective search space used:   383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)