MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-341O09
Chromosome	2 (Build37)
Map Location	27,280,849 - 27,281,243
singlet/doublet	singlet
Overlap gene	Vav2
Upstream gene	AU024582, Notch1, Egfl7, Agpat2, B230317C12Rik, 5730588L14Rik, LOC100039446, Lcn4, LOC669582, Abo, Surf6, Surf5-ps, Surf5, Rpl7a, Surf1, Surf2, Surf4, Gm711, Rexo4, Adamts13, 5930434B04Rik, Slc2a6, LOC665315, 1110002H13Rik, Adamtsl2, C630035N08Rik, Dbh, Sardh
Downstream gene	D2Bwg1423e, Brd3, Wdr5, Rxra, Col5a1, Fcnb, Olfm1
Link	Open Mouse BAC browser

Click to get alignment info.

name	AU024582 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227648 MGI:2139207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Notch1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18128 MGI:97363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Egfl7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353156 MGI:2449923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Agpat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67512 MGI:1914762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230317C12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56279 MGI:1927576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730588L14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329369 MGI:3045374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC100039446 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Lcn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16821 MGI:102668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669582 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669582
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Abo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80908 MGI:2135738
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Surf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20935 MGI:98447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Surf5-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20934 MGI:104996
definition	note : surfeit gene 5, pseudogene pseudo : _no_value

name	Surf5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20933 MGI:98446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Rpl7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27176 MGI:1353472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Surf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20930 MGI:98443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Surf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20931 MGI:98444
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Surf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20932 MGI:98445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm711 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:279029 MGI:2685557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rexo4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227656 MGI:2684957
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adamts13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:279028 MGI:2685556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5930434B04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381356 MGI:1924317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc2a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227659 MGI:2443286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665315 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	1110002H13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66139 MGI:1913389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adamtsl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77794 MGI:1925044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C630035N08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109349 MGI:1926106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dbh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13166 MGI:94864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sardh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192166 MGI:2183102
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vav2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22325 MGI:102718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D2Bwg1423e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329372 MGI:106557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs

name	Brd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67382 MGI:1914632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140858 MGI:2155884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rxra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20181 MGI:98214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col5a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12831 MGI:88457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fcnb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14134 MGI:1341158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56177 MGI:1860437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	AU024582 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378049 GeneID:227648 MGI:2139207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU024582 transcript_id : NM_153125.2

name	Notch1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543331 GeneID:18128 MGI:97363
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Notch gene homolog 1 (Drosophila) transcript_id : NM_008714.2

name	Egfl7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38570122 GeneID:353156 MGI:2449923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGF-like domain 7 transcript_id : NM_178444.3

name	Egfl7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38570126 GeneID:353156 MGI:2449923
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGF-like domain 7 transcript_id : NM_198725.1

name	Egfl7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38570124 GeneID:353156 MGI:2449923
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGF-like domain 7 transcript_id : NM_198724.1

name	Agpat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956161 GeneID:67512 MGI:1914762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) transcript_id : NM_026212.1

name	B230317C12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364267 GeneID:56279 MGI:1927576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230317C12 gene transcript_id : NM_019833.2

name	5730588L14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249252 GeneID:329369 MGI:3045374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 5730588L14 gene, transcript variant 2 transcript_id : XM_488938.4

name	5730588L14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249253 GeneID:329369 MGI:3045374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 5730588L14 gene, transcript variant 1 transcript_id : XM_001475516.1

name	LOC100039446 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249230 GeneID:100039446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to odorant binding protein 2A transcript_id : XM_001472904.1

name	Lcn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754515 GeneID:16821 MGI:102668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipocalin 4 transcript_id : NM_010695.1

name	Abo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802622 GeneID:80908 MGI:2135738
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) transcript_id : NM_030718.3

name	Surf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366474 GeneID:20935 MGI:98447
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : surfeit gene 6 transcript_id : NM_009298.3

name	Surf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76781478 GeneID:20933 MGI:98446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : surfeit gene 5 transcript_id : NM_001033908.1

name	Surf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76781477 GeneID:20933 MGI:98446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : surfeit gene 5 transcript_id : NM_011513.2

name	Rpl7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803092 GeneID:27176 MGI:1353472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L7a transcript_id : NM_013721.3

name	Surf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7363454 GeneID:20930 MGI:98443
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : surfeit gene 1 transcript_id : NM_013677.1

name	Surf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66793419 GeneID:20931 MGI:98444
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : surfeit gene 2 transcript_id : NM_013678.2

name	Surf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981472 GeneID:20932 MGI:98445
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : surfeit gene 4 transcript_id : NM_011512.2

name	Gm711 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76781471 GeneID:279029 MGI:2685557
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 711, (NCBI) transcript_id : NM_198628.2

name	Rexo4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76563951 GeneID:227656 MGI:2684957
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : REX4, RNA exonuclease 4 homolog (S. cerevisiae) transcript_id : NM_207234.2

name	Adamts13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205379 GeneID:279028 MGI:2685556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 transcript_id : NM_001001322.2

name	5930434B04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366438 GeneID:381356 MGI:1924317
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5930434B04 gene transcript_id : NM_029862.2

name	Slc2a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369953 GeneID:227659 MGI:2443286
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 2 (facilitated glucose transporter), member 6 transcript_id : NM_172659.1

name	1110002H13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347300 GeneID:66139 MGI:1913389
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110002H13 gene transcript_id : NM_025376.2

name	Adamtsl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037506 GeneID:77794 MGI:1925044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADAMTS-like 2 transcript_id : NM_029981.1

name	C630035N08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359024 GeneID:109349 MGI:1926106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C630035N08 gene transcript_id : NM_175427.3

name	Dbh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815860 GeneID:13166 MGI:94864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopamine beta hydroxylase transcript_id : NM_138942.3

name	Sardh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20149747 GeneID:192166 MGI:2183102
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcosine dehydrogenase transcript_id : NM_138665.1

name	Vav2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678554 GeneID:22325 MGI:102718
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vav 2 oncogene transcript_id : NM_009500.1

name	D2Bwg1423e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249234 GeneID:329372 MGI:106557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs product : DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed transcript_id : XM_001473037.1

name	Brd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364270 GeneID:67382 MGI:1914632
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain containing 3 transcript_id : NM_023336.3

name	Wdr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18252789 GeneID:140858 MGI:2155884
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 5 transcript_id : NM_080848.1

name	Rxra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579898 GeneID:20181 MGI:98214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoid X receptor alpha transcript_id : NM_011305.3

name	Col5a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7656986 GeneID:12831 MGI:88457
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type V, alpha 1 transcript_id : NM_015734.1

name	Fcnb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404439 GeneID:14134 MGI:1341158
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ficolin B transcript_id : NM_010190.1

name	Olfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370352 GeneID:56177 MGI:1860437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactomedin 1 transcript_id : NM_001038613.1

name	Olfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370358 GeneID:56177 MGI:1860437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactomedin 1 transcript_id : NM_001038614.1

name	Olfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370356 GeneID:56177 MGI:1860437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactomedin 1 transcript_id : NM_019498.2

name	Olfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370348 GeneID:56177 MGI:1860437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactomedin 1 transcript_id : NM_001038612.1

name	AU024582 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378050 GeneID:227648 MGI:2139207
definition	GO_component : GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0004445 - inositol-polyphosphate 5-phosphatase activity [Evidence ISS] codon_start : 1 product : hypothetical protein LOC227648 protein_id : NP_694765.2

name	Notch1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543332 CCDS:CCDS15806.1 GeneID:18128 MGI:97363
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0004623 - phospholipase A2 activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0042640 - anagen [Evidence IMP]; GO:0007409 - axonogenesis [Evidence IDA] [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IMP]; GO:0001708 - cell fate specification [Evidence IMP]; GO:0007386 - compartment specification [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0035116 - embryonic hindlimb morphogenesis [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0007492 - endoderm development [Evidence IMP]; GO:0008544 - epidermis development [Evidence IGI]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0030900 - forebrain development [Evidence IGI] [Evidence IMP]; GO:0007440 - foregut morphogenesis [Evidence IMP]; GO:0010001 - glial cell differentiation [Evidence IMP]; GO:0031069 - hair follicle morphogenesis [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0030216 - keratinocyte differentiation [Evidence IMP]; GO:0016042 - lipid catabolism [Evidence IEA]; GO:0030324 - lung development [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP]; GO:0045665 - negative regulation of neuron differentiation [Evidence IMP]; GO:0048663 - neuron fate commitment [Evidence IGI]; GO:0007219 - Notch signaling pathway [Evidence IMP] [Evidence IDA] [Evidence IC]; GO:0043065 - positive regulation of apoptosis [Evidence IGI] [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0050793 - regulation of development [Evidence IEA]; GO:0050678 - regulation of epithelial cell proliferation [Evidence IMP]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048103 - somatic stem cell division [Evidence IGI] [Evidence IDA]; GO:0002040 - sprouting angiogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : major type A protein; transmembrane receptor Notch1 product : Notch gene homolog 1 protein_id : NP_032740.2

name	Egfl7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38570123 CCDS:CCDS15807.1 GeneID:353156 MGI:2449923
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] [Evidence NAS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0001568 - blood vessel development [Evidence IEP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0001570 - vasculogenesis [Evidence IEP] codon_start : 1 note : isoform 1 precursor is encoded by transcript variant a; vascular endothelial-statin; NEU1 protein product : vascular endothelial statin isoform 1 precursor protein_id : NP_848538.2

name	Egfl7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38570125 CCDS:CCDS15807.1 GeneID:353156 MGI:2449923
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] [Evidence NAS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0001568 - blood vessel development [Evidence IEP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0001570 - vasculogenesis [Evidence IEP] codon_start : 1 note : isoform 1 precursor is encoded by transcript variant b; vascular endothelial-statin; NEU1 protein product : vascular endothelial statin isoform 1 precursor protein_id : NP_942017.1

name	Egfl7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38570127 CCDS:CCDS15808.1 GeneID:353156 MGI:2449923
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] [Evidence NAS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0001568 - blood vessel development [Evidence IEP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0001570 - vasculogenesis [Evidence IEP] codon_start : 1 note : isoform 2 precursor is encoded by transcript variant c; vascular endothelial-statin; NEU1 protein product : vascular endothelial statin isoform 2 precursor protein_id : NP_942018.1

name	Agpat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956162 CCDS:CCDS15809.1 GeneID:67512 MGI:1914762
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003841 - 1-acylglycerol-3-phosphate O-acyltransferase activity [Evidence IDA] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008654 - phospholipid biosynthesis [Evidence NAS] [Evidence IEA] codon_start : 1 product : 1-acylglycerol-3-phosphate O-acyltransferase 2 protein_id : NP_080488.1

name	B230317C12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790001 GeneID:56279 MGI:1927576
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy function : expression of this gene product inhibits the growth of E. coli product : hypothetical protein LOC56279 protein_id : NP_062807.1

name	5730588L14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51706052 GeneID:329369 MGI:3045374
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_488938.1

name	5730588L14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249254 GeneID:329369 MGI:3045374
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001475566.1

name	LOC100039446 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249231 GeneID:100039446
definition	codon_start : 1 product : similar to odorant binding protein 2A protein_id : XP_001472954.1

name	Lcn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754516 CCDS:CCDS15810.1 GeneID:16821 MGI:102668
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005550 - pheromone binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 function : transportation of lipophilic molecules, possible pheromone-carrier product : lipocalin 4 protein_id : NP_034825.1

name	Abo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560019 CCDS:CCDS15811.1 GeneID:80908 MGI:2135738
definition	GO_function : GO:0004381 - fucosylgalactoside 3-alpha-galactosyltransferase activity [Evidence IDA]; GO:0004380 - glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) product : cis-AB transferase protein_id : NP_109643.2

name	Surf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678185 CCDS:CCDS15812.1 GeneID:20935 MGI:98447
definition	GO_component : GO:0001652 - granular component [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA] [Evidence IEA]; GO:0003723 - RNA binding [Evidence IDA] [Evidence IEA] GO_process : GO:0042255 - ribosome assembly [Evidence NAS] codon_start : 1 product : surfeit gene 6 protein_id : NP_033324.1

name	Surf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76781479 CCDS:CCDS15813.1 GeneID:20933 MGI:98446
definition	GO_component : GO:0000119 - mediator complex [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : surfeit gene 5 isoform 2 protein_id : NP_001029080.1

name	Surf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755700 CCDS:CCDS15814.1 GeneID:20933 MGI:98446
definition	GO_component : GO:0000119 - mediator complex [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : surfeit gene 5 isoform 1 protein_id : NP_035643.1

name	Rpl7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305443 CCDS:CCDS15815.1 GeneID:27176 MGI:1353472
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0042254 - ribosome biogenesis and assembly [Evidence IEA] codon_start : 1 note : surfeit 3 product : ribosomal protein L7a protein_id : NP_038749.1

name	Surf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7363455 GeneID:20930 MGI:98443
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IMP] codon_start : 1 exception : mismatches in translation product : surfeit gene 1 protein_id : NP_038705.1

name	Surf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305529 CCDS:CCDS15816.1 GeneID:20931 MGI:98444
definition	codon_start : 1 product : surfeit gene 2 protein_id : NP_038706.1

name	Surf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755698 CCDS:CCDS15817.1 GeneID:20932 MGI:98445
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : surfeit gene 4 protein_id : NP_035642.1

name	Gm711 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76781472 CCDS:CCDS15818.1 GeneID:279029 MGI:2685557
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens chromosome 9 open reading frame 96 (C9orf96) product : hypothetical protein LOC279029 protein_id : NP_941030.2

name	Rexo4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76563952 CCDS:CCDS15819.1 GeneID:227656 MGI:2684957
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA] codon_start : 1 note : Xenopus prevents mitotic catastrophe 2 homolog product : XPMC2 prevents mitotic catastrophe 2 homolog protein_id : NP_997117.2

name	Adamts13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47604978 CCDS:CCDS15820.1 GeneID:279028 MGI:2685556
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004175 - endopeptidase activity [Evidence IMP] [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007599 - hemostasis [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] [Evidence IDA] codon_start : 1 note : von Willebrand factor-cleaving protease; vWF-CP mRNA for von Willebrand factor-cleaving product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 13 protein_id : NP_001001322.1

name	5930434B04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037485 GeneID:381356 MGI:1924317
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : likely ortholog of H. sapiens chromosome 9 open reading frame 7 (C9orf7) product : hypothetical protein LOC381356 protein_id : NP_084138.1

name	Slc2a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369954 CCDS:CCDS15822.1 GeneID:227659 MGI:2443286
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 2 (facilitated glucose transporter), member 6 protein_id : NP_766247.1

name	1110002H13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384750 CCDS:CCDS15823.1 GeneID:66139 MGI:1913389
definition	codon_start : 1 product : hypothetical protein LOC66139 protein_id : NP_079652.1

name	Adamtsl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037507 CCDS:CCDS15824.1 GeneID:77794 MGI:1925044
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0031012 - extracellular matrix [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : TSP1-repeats containing protein product : ADAMTS-like 2 protein_id : NP_084257.1

name	C630035N08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425144 GeneID:109349 MGI:1926106
definition	codon_start : 1 product : hypothetical protein LOC109349 protein_id : NP_780636.1

name	Dbh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110815861 GeneID:13166 MGI:94864
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0004500 - dopamine beta-monooxygenase activity [Evidence IEA]; GO:0031418 - L-ascorbic acid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008306 - associative learning [Evidence IMP]; GO:0048149 - behavioral response to ethanol [Evidence IMP]; GO:0001974 - blood vessel remodeling [Evidence IMP]; GO:0042423 - catecholamine biosynthesis [Evidence IEA]; GO:0006584 - catecholamine metabolism [Evidence IEA]; GO:0001816 - cytokine production [Evidence IMP]; GO:0042420 - dopamine catabolism [Evidence IMP]; GO:0042596 - fear response [Evidence IMP]; GO:0042593 - glucose homeostasis [Evidence IMP]; GO:0006548 - histidine catabolism [Evidence IEA]; GO:0042309 - homoiothermy [Evidence IMP]; GO:0002443 - leukocyte mediated immunity [Evidence IMP]; GO:0050900 - leukocyte migration [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0042711 - maternal behavior [Evidence IMP]; GO:0007613 - memory [Evidence IMP]; GO:0042421 - norepinephrine biosynthesis [Evidence IMP]; GO:0045907 - positive regulation of vasoconstriction [Evidence IMP]; GO:0042981 - regulation of apoptosis [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0001975 - response to amphetamine [Evidence IMP]; GO:0048265 - response to pain [Evidence IMP]; GO:0008542 - visual learning [Evidence IMP] codon_start : 1 product : dopamine beta hydroxylase protein_id : NP_620392.2

name	Sardh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149748 CCDS:CCDS15826.1 GeneID:192166 MGI:2183102
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008480 - sarcosine dehydrogenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006546 - glycine catabolism [Evidence IEA] codon_start : 1 product : sarcosine dehydrogenase protein_id : NP_619606.1

name	Vav2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678555 CCDS:CCDS15827.1 GeneID:22325 MGI:102718
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005154 - epidermal growth factor receptor binding [Evidence IPI]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IMP]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016477 - cell migration [Evidence IGI]; GO:0030031 - cell projection biogenesis [Evidence IGI]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030032 - lamellipodium biogenesis [Evidence IGI]; GO:0043552 - positive regulation of phosphoinositide 3-kinase activity [Evidence IGI]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IMP] codon_start : 1 product : Vav2 oncogene protein_id : NP_033526.1

name	D2Bwg1423e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249235 GeneID:329372 MGI:106557
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473087.1

name	Brd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981064 CCDS:CCDS15828.1 GeneID:67382 MGI:1914632
definition	codon_start : 1 exception : mismatches in translation note : bromodomain-containing 3 product : bromodomain containing 3 protein_id : NP_075825.2

name	Wdr5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18252790 CCDS:CCDS15829.1 GeneID:140858 MGI:2155884
definition	GO_component : GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0001501 - skeletal development [Evidence IDA] codon_start : 1 note : Bmp2-induced product : WD repeat domain 5 protein_id : NP_543124.1

name	Rxra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755384 CCDS:CCDS15830.1 GeneID:20181 MGI:98214
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IPI] [Evidence ISS] [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : RXR alpha 1 product : retinoid X receptor alpha protein_id : NP_035435.1

name	Col5a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7656987 CCDS:CCDS15831.1 GeneID:12831 MGI:88457
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : pro-alpha1(V) collagen; procollagen type V alpha 1 product : procollagen, type V, alpha 1 protein_id : NP_056549.1

name	Fcnb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77404440 CCDS:CCDS15832.1 GeneID:14134 MGI:1341158
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : ficolin B protein_id : NP_034320.1

name	Olfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370353 CCDS:CCDS15833.1 GeneID:56177 MGI:1860437
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016524 - latrotoxin receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0051259 - protein oligomerization [Evidence IDA] codon_start : 1 note : isoform c is encoded by transcript variant 3; Noelin 1; Noelin 2; Pancortin 1-4; olfactomedin related ER localized protein product : olfactomedin 1 isoform c protein_id : NP_001033702.1

name	Olfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370359 GeneID:56177 MGI:1860437
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016524 - latrotoxin receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0051259 - protein oligomerization [Evidence IDA] codon_start : 1 note : isoform d is encoded by transcript variant 4; Noelin 1; Noelin 2; Pancortin 1-4; olfactomedin related ER localized protein product : olfactomedin 1 isoform d protein_id : NP_001033703.1

name	Olfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370357 CCDS:CCDS15834.1 GeneID:56177 MGI:1860437
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016524 - latrotoxin receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0051259 - protein oligomerization [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; Noelin 1; Noelin 2; Pancortin 1-4; olfactomedin related ER localized protein product : olfactomedin 1 isoform a protein_id : NP_062371.2

name	Olfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370349 CCDS:CCDS15835.1 GeneID:56177 MGI:1860437
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016524 - latrotoxin receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0051259 - protein oligomerization [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; Noelin 1; Noelin 2; Pancortin 1-4; olfactomedin related ER localized protein product : olfactomedin 1 isoform b protein_id : NP_001033701.1

name	LOC669582 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669582
definition	number : 5 pseudo : _no_value

name	LOC669582 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669582
definition	number : 4 pseudo : _no_value

name	LOC669582 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669582
definition	number : 3 pseudo : _no_value

name	LOC669582 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669582
definition	number : 2 pseudo : _no_value

name	LOC669582 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669582
definition	number : 1 pseudo : _no_value

name	LOC665315 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249257 GeneID:665315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to ribosomal protein L6 pseudo : _no_value transcript_id : XR_032494.1

clone name	MSMg01-235J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-350G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498P09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-383E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174L07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-341O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307O22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-341O09.T7 (MSMg01no341_o09.b1)	MSMg01-341O09.TJ (MSMg01no341_o09.g1)
ACC	AG455581	AG455582
length	755	756
length of high quality (start - end)	404 (45 - 448)	446 (74 - 519)
definition	CHROMAT_FILE: MSMg01no341_o09.b1 PHD_FILE: MSMg01no341_o09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:31:16 2005	CHROMAT_FILE: MSMg01no341_o09.g1 PHD_FILE: MSMg01no341_o09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:31:16 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGA ATTCCCGGCGTCCACTAGGAGTTTCGAAGTGGGCGGGTCGCACCTGGACA GTACCCGGCTGAACTAGAGCTGCCTAACTCTTCTCTCCACCTCCCAGATC CCTTTATAGAGCGACCCCCGAAGGGCGGGCCACATGCCTCGAATTTGCTT AACTCTCGGCCAAGTTCCCTTCAAGGGGCCAAGAAAAGCAGCTTCAGCCA GCAGAGCGGACATTTTCCTGCCCTGCCCTGCCCTGCCCTGCCCTGCGGCC AAACGCGTGTCTTGGTCTCCACAAAGGCCACACTGGAGCGACCACCGAAG TGGGGGCAATGAGAAGGCGAAGAAGACTCCAACCCAGAGGCTATCCAGGA AGGCCCCCGAGGCAGCTGGTCCTGGGCTGGGGTCCGGGAGGAGGCGCAGG CCATAGAGGGGGCGGCGCCCGGCCTCCCCGCTTCCTTCGGACGGAACACT CCTTCCGGTTTGGGCCCTCCCGCTATCTGGGGTCACCCGAAATCCCTTCT TGCCTTCTCCCCTTTTACCGCCCCTTGTTATCCCTCCCTGGCCCTCTTGT CTTTTGCTCTTTTTTTCCTTTTCTCTTCCCCCCTTCTTTTCTTTCTCTCG CTATCCCCCTACTTTCATTCTCCTTATTTCTATTGTCCTTTTCGCCCTCC TTCTACTCCCTTTTTCACTTTATTGGGCATTTCCGCCCTTCCTTTCCCCC GCGCC	GATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXATTCCCTAGCTCAGTGTTCCAATTTCC TTTCTGTTGGTGTCACAAATACTTCGACCAAAAGCAGCTTAGGGGAAGAA AGTGTTTATTTAAATGTACAGGTTATGCCAGTCATTGAGGGAAGCAGGAT AGGTTCCTGAAGCAGAAACCATGAAGGAAAGCTGCTAACTGGGTCCCTCA TGGACCCTTGTTCAGCTAGCTTTCTTATAGAGGCTCACCTACCTAGGGAT AGTGCTGCCCACAGCGGGCCAGGCCCTCCTGAATCAATTCAGTCAAGACA ATTCCCCCGCAAACATACCCAAAGGCCAATCCTTCACTTGAGACGCCTTT CCCAGGTACATCTGGGCTGTGTCAAATTGACAGTCCCCCCTCCCTTCTCA ATAGTACATGGGTGACCATGGGCTTGGGTAGGAGCCAGTGATCTAGAATG AAGGCCAGACCCTCCCCTTCCCAAAGGCTGAGGTTGAGAAAGGGCCACCA ACACCCCTTAAGTGTCCCCGGGGTATCTGACTCTGGGGCAAAGAAGAGGC CTGTGAAGTGATACTTCCCTTTCGCCGCCACACATTCTTCCGGTTACTGG GTGTCCGACAAACACGCGCCTCTCCTTTAAGTGGAAACCCTATGCGCCCC TTAATCCTACTTGACCCACTTTGGTAGGATTGTGCCTACTTGAGCCACCC TTGGGG
quality values	Open. Hide. 8 10 8 8 9 11 15 31 37 30 21 21 21 18 22 28 23 34 22 22 22 34 34 43 28 28 26 22 22 22 25 12 11 10 10 8 8 8 15 14 16 14 14 12 21 21 34 34 23 19 15 19 27 29 39 30 25 12 11 11 11 12 11 11 13 21 28 28 30 37 37 37 48 48 48 48 57 57 57 57 57 57 59 59 59 59 57 48 48 59 59 48 48 48 48 48 42 42 42 42 57 46 47 47 39 43 43 44 44 57 57 54 54 54 54 57 57 68 68 68 59 59 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 54 54 57 57 57 57 57 57 57 57 57 57 57 57 57 57 50 50 50 50 50 50 68 68 57 57 57 52 52 57 57 57 50 50 50 50 57 68 68 68 59 59 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 59 57 57 57 57 57 59 57 57 59 59 59 59 52 57 57 57 57 59 57 57 59 59 59 59 57 52 52 52 59 59 68 68 68 68 68 68 68 68 62 62 62 45 45 52 52 52 52 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 57 59 59 59 57 57 59 59 59 59 59 57 57 57 57 57 57 59 59 59 57 59 59 52 36 38 26 16 14 14 14 28 30 21 34 38 43 57 57 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 54 54 57 57 57 57 57 57 57 57 54 54 50 59 57 57 57 50 50 43 44 42 42 37 37 42 43 44 48 57 57 59 59 59 59 59 59 59 46 43 43 46 57 57 57 57 57 57 43 57 57 57 57 39 39 30 44 44 59 57 46 34 30 18 18 30 34 41 43 41 41 43 47 40 43 34 19 13 21 22 24 30 30 39 39 32 30 19 19 17 22 20 23 24 25 13 10 10 13 15 11 16 14 15 21 18 16 20 15 15 11 12 12 19 17 8 13 6 6 6 10 13 16 18 10 8 10 10 15 10 17 8 8 8 8 8 8 9 9 8 8 8 7 7 11 12 25 18 17 8 8 12 14 14 11 19 15 15 11 11 11 11 11 8 8 10 10 13 9 9 12 10 9 8 8 8 8 8 8 8 8 11 10 10 8 8 7 7 8 8 8 10 9 10 9 10 11 8 8 8 8 8 8 8 9 9 15 15 10 9 9 9 12 9 10 10 10 10 13 10 10 10 8 8 8 6 6 8 8 8 8 10 8 9 9 9 10 10 12 11 10 8 8 10 10 10 15 13 11 8 8 9 9 10 11 14 16 15 15 13 11 10 10 13 11 8 8 8 8 9 10 13 13 12 18 17 12 10 9 9 9 12 10 12 8 8 10 9 8 8 6 6 10 8 10 12 9 9 11 11 10 10 10 10 8 8 8 8 10 8 9 9 9 12 10 15 13 14 9 9 9 13 10 9 8 6 6 6 6 6 10 9 10 10 10 9 11 10 10 17 10 8 8 8 10 14 8 8 8 10 13 12 18 11 12 12 10 13 9 9 9 9 15 10 10 8 8 8 8 8 9 9 9 10 14 11 12 12 12 9 8 8 8 11 10 10 13 15 24 22 22 13 13 11 9 9 9 9 9	Open. Hide. 8 8 8 8 8 8 9 8 7 7 9 9 16 16 29 29 37 37 44 41 41 39 39 39 39 39 41 21 19 13 13 9 9 9 11 19 22 16 10 10 10 21 21 37 30 18 23 11 11 10 21 21 42 44 28 23 11 15 10 9 12 12 14 24 28 57 48 37 37 37 37 40 42 42 42 47 68 68 57 57 68 57 53 50 54 54 54 54 68 59 50 50 48 48 48 51 59 59 68 68 68 68 68 68 68 68 57 68 68 68 68 51 50 50 48 48 48 57 57 57 57 68 57 57 57 57 50 50 50 57 57 57 59 59 59 68 68 68 57 57 57 59 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 68 57 57 57 57 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 57 57 57 57 57 57 59 57 57 57 62 62 62 62 62 68 68 68 68 68 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 62 62 62 68 68 68 68 68 68 59 59 59 59 59 59 57 68 68 68 68 68 57 59 57 59 59 59 57 68 57 57 57 57 59 57 57 52 52 45 52 45 57 59 57 52 59 59 59 59 59 57 57 57 57 57 57 57 57 68 68 68 68 68 68 59 59 57 57 57 57 57 57 59 59 59 59 59 57 52 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 59 48 48 50 59 48 48 57 57 59 48 54 59 59 59 59 59 59 57 57 57 57 57 59 59 59 59 59 59 57 57 59 59 59 57 57 54 57 57 59 59 59 59 47 43 43 43 46 46 57 57 43 46 48 57 48 43 43 43 43 48 59 59 57 57 57 57 57 57 57 59 48 43 43 43 43 43 39 39 36 36 36 37 37 39 36 37 43 34 34 28 24 25 34 34 31 31 39 36 37 39 27 26 28 32 30 31 20 19 19 16 14 16 28 28 28 39 39 32 32 20 23 19 30 34 34 30 24 24 24 24 20 31 20 20 20 22 24 30 27 25 26 27 14 11 9 9 9 9 12 12 12 10 10 8 13 8 8 8 8 10 15 12 14 13 24 9 6 6 6 6 6 6 10 15 15 17 19 18 14 15 9 9 9 6 6 8 8 8 8 9 9 12 12 10 9 9 8 8 8 10 10 13 9 8 10 8 8 8 10 10 10 21 10 10 10 8 7 6 6 8 8 8 8 8 9 11 12 10 10 10 10 11 8 8 8 8 8 8 8 8 8 7 6 7 10 6 6 6 6 8 8 10 10 10 10 9 8 8 8 8 8 8 12 12 13 13 14 14 16 15 12 11 11 10 10 9 7 7 10 8 8 8 8 8 8 8 9 11 11 6 8 6 6 8 6 10 11 6 6 6 6 8 6 8 8 8 8 8 10 10 9 9 9 8 7 8 8 8 8 8 8 10 13 14 11 11 10 10 8 8 8 8 8 8 8 8 10 11 11 8 8 8 8 8 8 8 11 11 11 11 11 9 9 10 10 15 8 8 8 8 8 8 8 8 8 6 6 8 8 8 6 6 8 10 13 12 10 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no341_o09.b1 MSMg01no341_o09.b1 CHROMAT_FILE:
MSMg01no341_o09.b1 PHD_FILE: MSMg01no341_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:16 2005
         (404 letters)



>mm_chr2_27280645_27281448
          Length = 804

 Score =  735 bits (380), Expect = 0.0
 Identities = 393/400 (98%), Gaps = 5/400 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcccggcgtccactaggagtttcgaagtgggcgggtcgcacctggacagtacccgg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccggcgtccactaggagtttcgaagtgggcgggtcgcacctggacagtacccgg 264

                                                                       
Query: 65  ctgaactagagctgcctaactcttctctccacctcccagatccctttatagagcgacccc 124
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 ctgaactagagctgcctaactcttctctccacctcccagatccctttaaagagcgacccc 324

                                                                       
Query: 125 cgaagggcgggccacatgcctcgaatttgcttaactctcggccaagttcccttcaagggg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgaagggcgggccacatgcctcgaatttgcttaactctcggccaagttcccttcaagggg 384

                                                                       
Query: 185 ccaagaaaagcagcttcagccagcagagcggacattttcctgccctgccctgccctgccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaagaaaagcagcttcagccagcagagcggacattttcctgccctgccctgccctgccc 444

                                                                       
Query: 245 tgccctgcggccaaacgcgtgtcttggtctccacaaaggccacactggagcgaccaccga 304
           |||     ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 tgc-----ggccaaacgcgtgtcttggcctccacaaaggccacactggagcgaccaccga 499

                                                                       
Query: 305 agtgggggcaatgagaaggcgaagaagactccaacccagaggctatccaggaaggccccc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agtgggggcaatgagaaggcgaagaagactccaacccagaggctatccaggaaggccccc 559

                                                   
Query: 365 gaggcagctggtcctgggctggggtccgggaggaggcgca 404
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaggcagctggtcctgggctggggtccgggaggaggcgca 599


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space:   314025
Effective search space used:   314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information