Query= MSMg01no342_j13.b1 MSMg01no342_j13.b1 CHROMAT_FILE:
MSMg01no342_j13.b1 PHD_FILE: MSMg01no342_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:09 2005
(476 letters)
>mm_chr2_37483852_37484727
Length = 876
Score = 866 bits (448), Expect = 0.0
Identities = 462/470 (98%), Gaps = 6/470 (1%)
Strand = Plus / Plus
Query: 7 gaattccaggactgccagagctacacagagaaaccctgtctcaaaaaaaaaaaaaaaaaa 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattccaggacagccagagctacacagagaaaccctgtctcaaaaaaaaaaaaaaaaaa 272
Query: 67 aaaaaaagcttttaaatatatgagttatgagtcccaccaacattccctctcaatattctg 126
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 a------gcttttaaatatatgagttatgagtcccaccaacattccctctcaatattctg 326
Query: 127 ctaacagcaaatatggagtacactgcatgattcaagggatgcaaatacttttaaatggca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctaacagcaaatatggagtacactgcatgattcaagggatgcaaatacttttaaatggca 386
Query: 187 tacaagaacatggatactttatcgtttgtttccttggttatcagtgactctacagtggca 246
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tacaagaacatggatactttttcgtttgtttccttggttatcagtgactctacagtggca 446
Query: 247 aatatagtgtttattctactagctacaatgttactaaatctgaaggcataaaaccactgc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aatatagtgtttattctactagctacaatgttactaaatctgaaggcataaaaccactgc 506
Query: 307 ccggcttaaaccacaactaaaagaactgtgggttccctgtactgctgcaacattaaaaga 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccggcttaaaccacaactaaaagaactgtgggttccctgtactgctgcaacattaaaaga 566
Query: 367 caaaatggtacacacttattttctgctaagtgagctccacagcagatgtctacattgttt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caaaatggtacacacttattttctgctaagtgagctccacagcagatgtctacattgttt 626
Query: 427 cccattaacacctgccaacaaaaatcacaatctcattttattactcagtt 476
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cccattaacacctgccaacaaaaatcacaatctcattttattactcagtt 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_j13.g1 MSMg01no342_j13.g1 CHROMAT_FILE:
MSMg01no342_j13.g1 PHD_FILE: MSMg01no342_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:09 2005
(444 letters)
>mm_chr2_37668998_37669841
Length = 844
Score = 835 bits (432), Expect = 0.0
Identities = 441/444 (99%)
Strand = Plus / Minus
Query: 1 tgctggccacacctattagttaagtttcctcatactaaagaagagcccagattcaaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgctggccacacctattagttaagtttcctcatactaaagaagagcccagattcaaccaa 585
Query: 61 ccacggaaccgtaagcctgctcatctctcccaccagatctctctttttaagcaattttgc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 584 ccacggaaccgtaagcctgctcacctctcccaccagatctctctttttaagcaattttgc 525
Query: 121 ttgtcagaatggtgcaagtggccttaaagacagcctagaggtcaggaaggagacaagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttgtcagaatggtgcaagtggccttaaagacagcctagaggtcaggaaggagacaagttc 465
Query: 181 actctgatcacatgactttgactcagccacacataagtatttgtgtacagtgccctccag 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 464 actctgatcacatgactttgactcggccacacataagtatttgtgtacagtgccctccag 405
Query: 241 gctctgcctagttatctttttggagctccttagtctttgatatccaattgtacagacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gctctgcctagttatctttttggagctccttagtctttgatatccaattgtacagacttg 345
Query: 301 tcccttgtatcttgataactcctgtcatttgtgactacaagcatgtgtgtgaaggggagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcccttgtatcttgataactcctgtcatttgtgactacaagcatgtgtgtgaaggggagt 285
Query: 361 gttccttcttaacctgtccctatactatacttttagcttttgttcccaagatttcattca 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gttccttcttaacctgttcctatactatacttttagcttttgttcccaagatttcattca 225
Query: 421 ttagaaaaatgccgggggcttaga 444
||||||||||||||||||||||||
Sbjct: 224 ttagaaaaatgccgggggcttaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
