Query= MSMg01no343_c17.b1 MSMg01no343_c17.b1 CHROMAT_FILE:
MSMg01no343_c17.b1 PHD_FILE: MSMg01no343_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:53 2005
(463 letters)
>mm_chr2_67789480_67790344
Length = 865
Score = 849 bits (439), Expect = 0.0
Identities = 458/465 (98%), Gaps = 2/465 (0%)
Strand = Plus / Plus
Query: 1 cacaccgcctatttcttaatgagattgcaggcttatgtatgtaacacatctatctattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacaccgcctatttcttaatgagattgcaggcttatgtatgtaacacatctatctattcc 260
Query: 61 tctgtggctttcagcaaacatttctattgctgaagaggtggaatatcactttctcgtctc 120
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 261 tctgtggctttcagcaaacatttctattgctgaagaggtggagtttcactttctcgtctc 320
Query: 121 tttctcaatcgtgctcagataacttcttctgaccacgctctacctatccacccatgtttc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctcaatcatgctcagataacttcttctgaccacgctctacctatccacccatgtttc 380
Query: 181 taactctaaccatcctggattgcttttgttcttaaacagtcacgattccttatttggtct 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 taactctaaccatcctggattgcttttgttcttaaacagtcactattccttatttggtct 440
Query: 241 ctgcccactacattccctagcctagaccactttctcattttcttgtttgcttctaattaa 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccgcccactacattccctagcctagaccactttctcattttcttgtttgcttctaattaa 500
Query: 301 tctcttatcaggcattaacctgagcagcacttccttaatgatgatctaagagttaaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcttatcaggcattaacctgagcagcacttccttaatgatgatctaagagttaaattt 560
Query: 361 tccaccgtgatgtctaccataattttatctttatcatctgtttttttt--ctctctctaa 418
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 tccaccgtgatgtctaccataattttatctttatcatctgttttttttttctctctctaa 620
Query: 419 gtctttcctgactgtttgtttgtgtgctgaggattcaacttagaa 463
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctttcctgactgtttgtttgtgtgctgaggattcaacttagaa 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 865
Length adjustment: 10
Effective length of query: 453
Effective length of database: 855
Effective search space: 387315
Effective search space used: 387315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_c17.g1 MSMg01no343_c17.g1 CHROMAT_FILE:
MSMg01no343_c17.g1 PHD_FILE: MSMg01no343_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:54 2005
(455 letters)
>mm_chr2_67924930_67925784
Length = 855
Score = 826 bits (427), Expect = 0.0
Identities = 448/455 (98%)
Strand = Plus / Minus
Query: 1 caattccacatgaggcattcactactcttagaaatctcagtagtcctgagtactagtctg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 655 caattccacatgaggcattcactactcttagaaagctcagtagtcctgagtactagtctg 596
Query: 61 agaaatgaaggttcaaagaaacggaccacccagagttatttctggttgaagtgggatatt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 595 agaaatgaaggttcaaagaaatggaccacccagagttatttctggttgaagcgggatatt 536
Query: 121 acatgacacgctcagctcactgaatgcacagcacacattacatagtaaccgttgcataat 180
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 535 acatgacatgctcagctcactgaatgcacagcacacattacacagtaaccgttgcataat 476
Query: 181 gatctctctagttaggactagaattttgaaaaccagagtggatccaagttcataaaatta 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 475 gatctctctagttaggactagaattttgaaaaccagagtggattcaagttcataaaatta 416
Query: 241 tcatttcatctacttgccttttgatttactttcctaattgacaaagaaaaggatacagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcatttcatctacttgccttttgatttactttcctaattgacaaagaaaaggatacagtt 356
Query: 301 gaatcgctcagctgggactgtgcaacagtgactaacagctctcatgtagagagtacagga 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaattgctcagctgggactgtgcaacagtgactaacagctctcatgtagagagtacagga 296
Query: 361 aaaggtcgcccatcactgtggacagtctcatcaagcaagtcacctcccctgatcagattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaaggtcgcccatcactgtggacagtctcatcaagcaagtcacctcccctgatcagattt 236
Query: 421 ctggctgtttcaaaaaaccacagacaacgttccat 455
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ctggctgtttcaaaaaaccacagacaacgttccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
