Query= MSMg01no343_l08.b1 MSMg01no343_l08.b1 CHROMAT_FILE:
MSMg01no343_l08.b1 PHD_FILE: MSMg01no343_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:38 2005
(406 letters)
>mm_chr2_8475691_8476495
Length = 805
Score = 634 bits (328), Expect = 0.0
Identities = 374/402 (93%), Gaps = 23/402 (5%)
Strand = Plus / Plus
Query: 5 gaattccatgctttctgcttcaagttcctgtctgagttcctcccctgactcctatcaatg 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 227 gaattccatgctttctgcttcaggttcctgtctgagttcctcccctgactcctgtcaatg 286
Query: 65 atgaaccatgtcctgaaaatataaatcaaaaactcctttcttctctatgttgtctttggt 124
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atgcaccatgtcctgaaaatataaatcaaaaactcctttcttctctatgttgtctttggt 346
Query: 125 catagtattgtttataagaatgttttgctttgtttttttagatataaaatcacatgcaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 catagtattgtttataagaatgttttgctttgtttttttagatataaaatcacatgcaca 406
Query: 185 caggtacaaacacatggacacacataaaacacacacacacacacacacatacacacacac 244
|||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 407 caggtacaaacacatggacacacataaaacacacacac-cac-cac-------------- 450
Query: 245 tgccaacaacaacaacaacaatgaaactatctcaattttcattagaaataatattccaaa 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 451 ------caacaacaacaacaatgaaattatctcaattttcattagaaataatattccaaa 504
Query: 305 attcaatggggatactttagacattaaaaaaaatcatctgggaatggttctttttagggg 364
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 attcaatggggatactttagacattaaaaaaa-tcatctgggaatggttctttttagggg 563
Query: 365 agttccatatacatcgacaataaattagtatagagatataca 406
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 564 agttccatatacatcgacaataaattagtatacagatataca 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 805
Length adjustment: 9
Effective length of query: 397
Effective length of database: 796
Effective search space: 316012
Effective search space used: 316012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_l08.g1 MSMg01no343_l08.g1 CHROMAT_FILE:
MSMg01no343_l08.g1 PHD_FILE: MSMg01no343_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:38 2005
(341 letters)
>mm_chr2_8615121_8615861
Length = 741
Score = 617 bits (319), Expect = 0.0
Identities = 334/339 (98%)
Strand = Plus / Minus
Query: 3 ctctgtgtggtgtgtccatgctgccgttagagaacatgcatggtcttgtttttttctaaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctctgtgtggtgtgtccatgctgccgttagagaacatgcatggtcttgtttttttctaaa 482
Query: 63 tgctgctctcattcagaagtctcagaaaccagtggtacagcaataggaatgtaacaaaag 122
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 tgctgctctcattcagaagtctcagaaaccagtggtacagcaataggaatataacaaaag 422
Query: 123 gcctctgtttctacggtgctctcctgtgtgcggttcccagaatgatctcttctcaagact 182
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 gcctctgtttctacggtgttctcctgtgtgaggttcccagaatgatctcttctcaagact 362
Query: 183 agaagtggatcttaaaatccccccataaataccaagtgtattaatttagccctctaattc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaagtggatcttaaaatccccccataaataccaagtgtattaatttagccctctaattc 302
Query: 243 ccaaagcatataacaaggcagaatccctttctttgatttcagaggatttgctcatggaag 302
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaaagcatacaacaaggcagaatccctttctttgatttcagaggatttgctcatggaag 242
Query: 303 ggtgagcaggtgggatgtgccttcctttgtggcaaagca 341
||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 ggtgagcaggtgggatgtgccttccttcgtggcaaagca 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
