Query= MSMg01no343_l13.b1 MSMg01no343_l13.b1 CHROMAT_FILE:
MSMg01no343_l13.b1 PHD_FILE: MSMg01no343_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:39 2005
(384 letters)
>mm_chr2_3833891_3834674
Length = 784
Score = 586 bits (303), Expect = e-172
Identities = 321/327 (98%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 8 ggaattctgccaacattactcatgaagggacagactggacctggatgattgagtaaatga 67
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggaatcctgccaacattactcatgaagggacagactggacctggatgattgagtaaatga 268
Query: 68 gtcaatgaatcaataatattcaggaagaggaagggttttacagtgggcattcaattactt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtcaatgaatcaataatattcaggaagaggaagggttttacagtgggcattcaattactt 208
Query: 128 cagtggctttcaacctgcctcatggtgtgatgctttaatacagtttttcatgttgtagtg 187
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 207 cagtggctttcaacctgcctcatggtgtgatgctttaatatagttcttcatgttgtagtg 148
Query: 188 accccc-accatgaaattatttttgttgctactttctaactgtaattttgctactgttct 246
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 147 accccccaccatgaaattatttttgttgctacttcctaactgtaattttgctactgttct 88
Query: 247 gaatcataatgtaaatatctaacatgcaggatatttgatatgtgaccacccctgaggggt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gaatcataatgtaaatatctaacatgcaggatatttgatatgtgaccacccctgaggggt 28
Query: 307 tgtgatccataggttgagaattgctca 333
||||||| |||||||||||||||||||
Sbjct: 27 tgtgatctataggttgagaattgctca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_l13.g1 MSMg01no343_l13.g1 CHROMAT_FILE:
MSMg01no343_l13.g1 PHD_FILE: MSMg01no343_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:40 2005
(402 letters)
>mm_chr2_3661980_3662781
Length = 802
Score = 762 bits (394), Expect = 0.0
Identities = 400/402 (99%)
Strand = Plus / Plus
Query: 1 cacagtgtagaggtgcatagctcagggatttcagggatatgagaggatgctgcagatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagtgtagaggtgcatagctcagggatttcagggatatgagaggatgctgcagatcaa 260
Query: 61 gggaggaaagctttgggaactgggaggggactcaagtggagggagcttaaatgtgaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggaggaaagctttgggaactgggaggggactcaagtggagggagcttaaatgtgaactt 320
Query: 121 tgcccttttggaattccaagcttcttgactttgggtaggttgctaatctcctgagttctg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tgcccttttggaattccaagcttcttgactttgggtaggttgctaatctcctgatttctg 380
Query: 181 ctactcctcctactcctccatcagtaaggacacaaatacttgctgcatagaactccgagg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 ctactcctcctactcctccatcagtaaggacacaaatacttgctgcatagaactcccagg 440
Query: 241 gatttttagagatgagatccaagtgttgcaaacaatgcctacaatgctgtaagcactcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatttttagagatgagatccaagtgttgcaaacaatgcctacaatgctgtaagcactcaa 500
Query: 301 aagttccctggtaatagagtagtgcttcagcgagccacttgtagaccaagccatgtcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagttccctggtaatagagtagtgcttcagcgagccacttgtagaccaagccatgtcact 560
Query: 361 catggaattactgttacaagtttcaaagaactgataacaaac 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catggaattactgttacaagtttcaaagaactgataacaaac 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
