Query= MSMg01no344_h01.b1 MSMg01no344_h01.b1 CHROMAT_FILE:
MSMg01no344_h01.b1 PHD_FILE: MSMg01no344_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:37 2005
(381 letters)
>mm_chr2_9203670_9204450
Length = 781
Score = 683 bits (353), Expect = 0.0
Identities = 371/377 (98%)
Strand = Plus / Minus
Query: 5 gaattctctgtgtacggcattccctcacctccattccctgtgaggactgtggtctacctg 64
|||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 581 gaattctctgtgcatggcattccctcacctccattccctgtgaagactgtggtctacctg 522
Query: 65 tggaaatagtaatctttatttgttgaataggaggcagagcagcacccaaagtacagttca 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 521 tggaaatagtaatctttatttgttgaatgggaggcagagcagcacccaaagtacagttca 462
Query: 125 catgaacatatgtgaccttgacaactatgaacaagaatgagtgcacccacccttccaaaa 184
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 461 catgaacatctgtgaccttgacaactatgaacaagaatgagcgcacccacccttccaaaa 402
Query: 185 agtcaacagaaaaggatcaattaagtggagtggtgtaaatttttttggaggccaggttgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agtcaacagaaaaggatcaattaagtggagtggtgtaaatttttttggaggccaggttgc 342
Query: 245 ctaccaacataggtttgcctatctcagaacaacatacagggaagcaagacttggaaatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctaccaacataggtttgcctatctcagaacaacatacagggaagcaagacttggaaatga 282
Query: 305 atgagaaaaatatattcaatcccataatcaaatgaaaaatgttttgggaatggttccagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgagaaaaatatattcaatcccataatcaaatgaaaaatgttttgggaatggttccagg 222
Query: 365 gagagttcctgaatcaa 381
|||||||||||||||||
Sbjct: 221 gagagttcctgaatcaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_h01.g1 MSMg01no344_h01.g1 CHROMAT_FILE:
MSMg01no344_h01.g1 PHD_FILE: MSMg01no344_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:37 2005
(550 letters)
>mm_chr2_9046390_9047339
Length = 950
Score = 1056 bits (546), Expect = 0.0
Identities = 549/550 (99%)
Strand = Plus / Plus
Query: 1 catacagtaatcatttcatccccaaagcatatatctgtctggcctcactgtattgttatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catacagtaatcatttcatccccaaagcatatatctgtctggcctcactgtattgttatg 260
Query: 61 acataccaaatagtctatgctcattcctatatcaatttggaactcgaattatttgctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acataccaaatagtctatgctcattcctatatcaatttggaactcgaattatttgctttc 320
Query: 121 cttagtttattcccagtgaaatcaaaagttggaatacctttctgtgcataagttggatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttagtttattcccagtgaaatcaaaagttggaatacctttctgtgcataagttggatgt 380
Query: 181 tctacagaggaatagctaccaaattgtggcatttttacttcctttttcttttcagtgtgt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tctacagaggaatagctaccaaattgcggcatttttacttcctttttcttttcagtgtgt 440
Query: 241 ctgcaaagatgtccatcaagcttatttacactttcatgttgcatagttttccaaaatgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgcaaagatgtccatcaagcttatttacactttcatgttgcatagttttccaaaatgta 500
Query: 301 ctcaactgggacagtgtcccctaagatttcttcacaatcatattgatcagaataatgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcaactgggacagtgtcccctaagatttcttcacaatcatattgatcagaataatgtca 560
Query: 361 cagctgtgccccaatgctcagtcataacatgaaaaattccccaatgattagtttattgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagctgtgccccaatgctcagtcataacatgaaaaattccccaatgattagtttattgac 620
Query: 421 ttaatattaagaaatttattaaaatgtcattttgtgtctttagagcagttagagaagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaatattaagaaatttattaaaatgtcattttgtgtctttagagcagttagagaagaaa 680
Query: 481 agtaaaataaaatccagacaaagctctgagttttgccattagtgtaccattttataacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtaaaataaaatccagacaaagctctgagttttgccattagtgtaccattttataacac 740
Query: 541 ataactaaaa 550
||||||||||
Sbjct: 741 ataactaaaa 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
