Query= MSMg01no344_p17.b1 MSMg01no344_p17.b1 CHROMAT_FILE:
MSMg01no344_p17.b1 PHD_FILE: MSMg01no344_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:20 2005
(438 letters)
>mm_chr2_149496828_149497666
Length = 839
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 5 gaattctcatagctccctaggagtcaaaagagaaacaaatgtctagtgtttggttagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gaattctcatagctccctaggagtcaaaagagaaacaaatgtctagtgtttggttagaaa 580
Query: 65 caaaaaggactgccctagtcccagcctgtgctagttttctttttagatctgtagaaagaa 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 579 caaaaaggactgccctagtcccggcctgtgctagttttctttttagatctgtagaaagaa 520
Query: 125 gtgaaaatcctgttaccagagcaagtgttagggtgacctatgaggcaatgttcagattta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtgaaaatcctgttaccagagcaagtgttagggtgacctatgaggcaatgttcagattta 460
Query: 185 ttgtggcgtattagcaatgatagtatagatctattaaaactaagaataaaggcatagcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttgtggcgtattagcaatgatagtatagatctattaaaactaagaataaaggcatagcat 400
Query: 245 aaagtctatggaaacaagaatgagactcaagtgctcctgttttaaggttctttaaatgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aaagtctatggaaacaagaatgagactcaagtgctcctgttttaaggttctttaaatgat 340
Query: 305 tttaggtggagggagaaaccaatttctagggacaggagtgttgtagatccttatcctgat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tttaggtggagggagaaaccaatttctagggacaggagtgttgtagatccttatcctgat 280
Query: 365 agatagatgaactgttatttaagtatggttgatttctgtatgtgtgagccata-gttcca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 279 agatagatgaactgttatttaagtatggttgatttctgtatgtgtgagccataggttcca 220
Query: 424 tacttttaatcatgc 438
|||||||||||||||
Sbjct: 219 tacttttaatcatgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 839
Length adjustment: 9
Effective length of query: 429
Effective length of database: 830
Effective search space: 356070
Effective search space used: 356070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_p17.g1 MSMg01no344_p17.g1 CHROMAT_FILE:
MSMg01no344_p17.g1 PHD_FILE: MSMg01no344_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:20 2005
(312 letters)
>mm_chr2_149409958_149410669
Length = 712
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%)
Strand = Plus / Plus
Query: 1 tacctacttagacttctaagtgaccttgatcactatatctataggaggccattctattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacctacttagacttctaagtgaccttgatcactatatctataggaggccattctattaa 260
Query: 61 gttcctggtagatactgaggcaatggtttatgttttaaacaccgtggtgaggtcagttac 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gttcctggtagatactgaggcaatggtttatgttttaaacaccctggtgaggtcagttac 320
Query: 121 aaataaaaaggtgacagtttagggatccaccagcaaagttaaagataacaatgtcaccat 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aaataaaaaggtgacagtttagggatccaccagcaaagttaaagataaaaatgtcaccat 380
Query: 181 ttacagcatgtaacttctattcttagcacaacagctatttctgttaccatttcaaataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttacagcatgtaacttctattcttagcacaacagctatttctgttaccatttcaaataca 440
Query: 241 tgtttgttttcatggatctgggttattttattatttatttatttattt 288
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttgggttcatggatctgggttattttattatttatttatttattt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
