Query= MSMg01no345_l07.b1 MSMg01no345_l07.b1 CHROMAT_FILE:
MSMg01no345_l07.b1 PHD_FILE: MSMg01no345_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:13 2005
(423 letters)
>mm_chr2_153762239_153763060
Length = 822
Score = 729 bits (377), Expect = 0.0
Identities = 405/419 (96%), Gaps = 8/419 (1%)
Strand = Plus / Minus
Query: 5 gaattctccaggaatatcaggagggtgaccagctcagagcccagcataagtgcagttgcc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaattctccaggaaaatcaggagggtgaccagctcagagcccagcataagtgcagttgcc 416
Query: 65 agtgtaaccacaaatgacgaccgagccccaactggcctgagcactcactgaggccttctg 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 agtgtaaccacaaatgatgaccgagccccaactggcctgagcactcactgaggccttctg 356
Query: 125 ctgcccgcacccagcccagcccaggcccagttttcacacctgttttttaccacctcctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctgcccgcacccagcccagcccaggcccagttttcacacctgttttttaccacctcctcc 296
Query: 185 aggcctcagccttcccactcactacttcaaagagccagggtgttctctctcctaccccgg 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggccccagccttcccactcactacttcaaagagccagggtgttctctctcctaccccgg 236
Query: 245 caagcctcggtccttcattgccagccctcccccctccccaagagatgctttctgcccttc 304
|||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 235 caagcctcggtccttcattgccagcc--------tccccaagagatgctttctgcccttc 184
Query: 305 cctaccagcaaaggtgctttgaaggcaggtggcatatatttgaatcctgacaagcttggc 364
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cctaccagtaaaggtgctttgaaggcaggtggcatatatttgaatcctgacaagcttggc 124
Query: 365 ttgtgtcagcacagcatcatctgttttcctggtcgggctcttctttgggactcagtttc 423
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 123 ttgtgtcagcacagcatcatctgttttcctggtcaggctcctctttgggactcagtttc 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 822
Length adjustment: 9
Effective length of query: 414
Effective length of database: 813
Effective search space: 336582
Effective search space used: 336582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_l07.g1 MSMg01no345_l07.g1 CHROMAT_FILE:
MSMg01no345_l07.g1 PHD_FILE: MSMg01no345_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:13 2005
(250 letters)
>mm_chr2_153635396_153636045
Length = 650
Score = 460 bits (238), Expect = e-134
Identities = 247/250 (98%)
Strand = Plus / Plus
Query: 1 tttgctttgactactgtccagacagaaactttctgggtaggtaatctttgtgtttccccg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgctttgactactgtccagacaggaactttctgggtaggtaatctttgtgtttccccg 260
Query: 61 gaagcagagttggggtggaggtggcagcagcctgggtattttcagagccaacaacaaggc 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gaagcagagttggggtggaggtggcagcagcctggggattttcagagccaacaacaaggc 320
Query: 121 tctgtagcacctggcctctgtttggcttcctctgcttctgatctacatcactgggaggtg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtagcacctgtcctctgtttggcttcctctgcttctgatctacatcactgggaggtg 380
Query: 181 gggtgactcaggcctgtcagagatggagacaggaaagggtgagagggacagtgacagatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtgactcaggcctgtcagagatggagacaggaaagggtgagagggacagtgacagatc 440
Query: 241 acagtgacat 250
||||||||||
Sbjct: 441 acagtgacat 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
