Query= MSMg01no346_d22.b1 MSMg01no346_d22.b1 CHROMAT_FILE:
MSMg01no346_d22.b1 PHD_FILE: MSMg01no346_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:53 2005
(343 letters)
>mm_chr2_169283767_169284508
Length = 742
Score = 524 bits (271), Expect = e-153
Identities = 318/341 (93%), Gaps = 15/341 (4%)
Strand = Plus / Plus
Query: 4 ggaattctttatact-gctctgagaaaatgctcgtgctggaaaagggatctcacatccct 62
|||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctata-tggttctgagaaaatgctcgtgctggaaaagggatctcacatccct 262
Query: 63 tctgctcatttactatgactagaagtaatttttttgtggatgaatcagagagagagagag 122
||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 tctactcatttactatgactagaagtaatttttt-gtggatgaatcagagagagaga--- 318
Query: 123 agagagagaaagtaaggagaatggatcgagggccgggctgctctgggagaatacgttggc 182
||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 319 ---------aagtaaggagaatggatcgagggccaggctgctctgggaggatacgttggc 369
Query: 183 tgcttctatgtgggatgccatgtttgatcaggctgcacacactctggtcctgggactgtt 242
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgcatctatgtgggatgccatgtttgatcaggctgcacacactctggtcctgggactgtc 429
Query: 243 caacttgaactctagatggttgtggttcatcctgtctcactacaaggtcttttctggttt 302
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 430 caacttgaactctagatggttgtggttcatcctgtctcaccacaaggtcttttctggttt 489
Query: 303 tgtcttttttttttttaaacatgccatcttttattattaaa 343
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgtcttttttttttttaaacatgccatcttttattattaaa 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 742
Length adjustment: 9
Effective length of query: 334
Effective length of database: 733
Effective search space: 244822
Effective search space used: 244822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_d22.g1 MSMg01no346_d22.g1 CHROMAT_FILE:
MSMg01no346_d22.g1 PHD_FILE: MSMg01no346_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:53 2005
(460 letters)
>mm_chr2_169426877_169427736
Length = 860
Score = 814 bits (421), Expect = 0.0
Identities = 451/461 (97%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 1 tccttatccatagactcagttacctgtggtcaactgtgctccaggctccatgtctgtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tccttatccatagactcagttacctgtggtcaactgtgctccaggctccatgtctgtgct 601
Query: 61 gggaaccttggcatgtttcccccgtggacatcaggaaaccactgtgttgtaaggttctct 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 600 gggaaccttggcatgtttcccccatggacatcaggaaaccactgtgttgtaaggttctct 541
Query: 121 ccagcctgaggcttgcttggaccactttctctctaagctccagcagctgaagatgcctcc 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 540 ccagcctgaggcttgcttggaccactttctctccaagctccagcagctgaagatgcctac 481
Query: 181 agtgagggttgcactggtggaaaatggcccctggttaatactgcatgggcttatacccca 240
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 480 agtgagggttgcactagtggaaaacggcccctggttaatactgcatgggcttatacccca 421
Query: 241 tcactcttacttgaaagacttgagtcactggtcccgtcattcctcaatgagaccccctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tcactcttacttgaaagacttgagtcactggtcccgtcattcctcaatgagaccccctgt 361
Query: 301 ttgtagggagccttccatcttgtccatgactccattttaagagtggatgctgtgctgagg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 360 ttgtagggagccttccatcttgtccatgactccattttaagagtggaagctgtgccaagg 301
Query: 361 agagtccgg-tgcgctgtcagccaggggctgaaggaggaagaaaatgaagtattcagaat 419
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agagtccggct-cgctgtcagccaggggctgaaggaggaagaaaatgaagtattcagaat 242
Query: 420 cagtcttggcttgaaagcacagatagtttccctccactgag 460
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagtcttggcttgaaagcacagatagtttccctccactgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
