Query= MSMg01no347_c07.b1 MSMg01no347_c07.b1 CHROMAT_FILE:
MSMg01no347_c07.b1 PHD_FILE: MSMg01no347_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:01 2005
(555 letters)
>mm_chr2_70669655_70670609
Length = 955
Score = 1035 bits (535), Expect = 0.0
Identities = 551/561 (98%), Gaps = 9/561 (1%)
Strand = Plus / Minus
Query: 4 ggaattccctcttctcaattctgtctaggtctgtgtaaagttgacaaagactgactttga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ggaattccctcttctcaattctgtctaggtctgtgtaaagttgacaaagactgactttga 882
Query: 64 ctgttatttttgttataaaggcagattggttgaagaagtgcaggtagaatgtgtgtgcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ctgttatttttgttataaaggcagattggttgaagaagtgcaggtagaatgtgtgtgcaa 822
Query: 124 ggccagctagggaaagatagta-tttaaaaaaaaatagattttttttttttttttttt-- 180
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 821 ggccagctagggaaagatagtatttttaaaaaaaatagattttttttttttttttttttt 762
Query: 181 ------gagattgaactcaggaccttgaacgaggattagctagtataagatttcagggat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tttttggagattgaactcaggaccttgaacgaggattagctagtataagatttcagggat 702
Query: 235 ttttgttttccccgtgtgtgataatttgtattttggtttaatcagcaaaatttcggggga 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ttttgttttccccgtgtgtgataatttgtattttggtttaatcagcaaaatttcggggga 642
Query: 295 gtatgagtaactgtgataacacttctctttacttttcaaattgttaaactgtgccatgtc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gtatgagtaactgtgataacacttctctttacttttcaaattgttaaactgtgccatgtc 582
Query: 355 aatcggggttgcactttgtatctgcaaacattgtataatcctcgcgtccttggaaggcgg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aatcggggttgcactttgtatctgcaaacattgtataatcctcgcgtccttggaaggcgg 522
Query: 415 cactttctgggaggggaacagcagcttgcagtgcactttataggaggggaaacatactgt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cactttctgggaggggaacagcagcttgcagtgcactttataggaggggaaacatactgt 462
Query: 475 tcttaagttggttatgatcttttcatgtcagacaaaataaatccattttgataatcttgt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tcttaagttggttatgatcttttcatgtcagacaaaataaatccattttgataatcttgt 402
Query: 535 gcttctagttctttgctgtgt 555
|||||||||||||||||||||
Sbjct: 401 gcttctagttctttgctgtgt 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_c07.g1 MSMg01no347_c07.g1 CHROMAT_FILE:
MSMg01no347_c07.g1 PHD_FILE: MSMg01no347_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:02 2005
(565 letters)
>mm_chr2_70606976_70607940
Length = 965
Score = 1087 bits (562), Expect = 0.0
Identities = 564/565 (99%)
Strand = Plus / Plus
Query: 1 ctaagtgttaacaacctattggcagaaaaagactaaaggaaccaagtacaaatgtgttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagtgttaacaacctattggcagaaaaagactaaaggaaccaagtacaaatgtgttac 260
Query: 61 attgacaggaaaaacacaaacatatacatgcacgcatacatacacacataaattggttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgacaggaaaaacacaaacatatacatgcacgcatacatacacacataaattggttaa 320
Query: 121 aattaatggacagaactgtataacccgaggagagaaaaggctagactcacaaaaagtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaatggacagaactgtataacccgaggagagaaaaggctagactcacaaaaagtcac 380
Query: 181 tttatcaaaaacaagaatgttaaacccaaatacatttgtgcccaccatttttagaagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttatcaaaaacaagaatgttaaacccaaatacatttgtgcccaccatttttagaagacg 440
Query: 241 ccatcgagtatatcatgcacagaatgaaccacactgtggacccaaatatccacttgtaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatcgagtatatcatgcacagaatgaaccacactgtggacccaaatatccacttgtaaa 500
Query: 301 taccacctactttcttggtgaggtcagtaaatgggtactaggcaagaggaatttatcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taccacctactttcttggtgaggtcagtaaatgggtactaggcaagaggaatttatcaca 560
Query: 361 tttttttaaaaaaaaatatgcaaaatgaaaaccatcagcttgattccacaagaatttcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttttttaaaaaaaaatatgcaaaatgaaaaccatcagcttgattccacaagaatttcta 620
Query: 421 caaagaagaaagatgtatttttataactaggaaagtacacaaacccttataaagattaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaagaagaaagatgtatttttataactaggaaagtacacaaacccttataaagattaaa 680
Query: 481 ctaagatgggaaatactanaataataatttaaaagctgaaacgcagcatacttcaaaact 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctaagatgggaaatactaaaataataatttaaaagctgaaacgcagcatacttcaaaact 740
Query: 541 cacattcatcttataaaactatgaa 565
|||||||||||||||||||||||||
Sbjct: 741 cacattcatcttataaaactatgaa 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
