Query= MSMg01no347_d19.b1 MSMg01no347_d19.b1 CHROMAT_FILE:
MSMg01no347_d19.b1 PHD_FILE: MSMg01no347_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:09 2005
(525 letters)
>mm_chr2_100171890_100172814
Length = 925
Score = 992 bits (513), Expect = 0.0
Identities = 519/521 (99%)
Strand = Plus / Minus
Query: 5 gaattcacaatatctacataagaaaaatattcaaatgctgctgaaaaattcaggagcata 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gaattcacaatatctacatgagaaaaatattcaaatgctgctgaaaaattcaggagcata 798
Query: 65 ctaaacaaatgtagaaatatgcttgttcttggaaaattcaatactcttaagacaacaata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ctaaacaaatgtagaaatatgcttgttcttggaaaattcaatactcttaagacaacaata 738
Query: 125 ttccctaaactgttatttaattgtattgagaacatacttgaatgcctaatagagagttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttccctaaactgttatttaattgtattgagaacatacttgaatgcctaatagagagttta 678
Query: 185 agcttttcaaatgtggcaaatatacttacatcaaatttgtatatgttagcataaaatgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agcttttcaaatgtggcaaatatacttacatcaaatttgtatatgttagcataaaatgat 618
Query: 245 aagaacttttagagaaagaaaaggtgtgttattccttcttctagaactaaaatacccaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aagaacttttagagaaagaaaaggtgtgttattccttcttctagaactaaaatacccaat 558
Query: 305 atagctgtaacaacttagacaatgttatactaagcacgaacagacaatgtagtaagatac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atagctgtaacaacttagacaatgttatactaagcacgaacagacaatgtagtaagatac 498
Query: 365 attatgtatttcaaaaaatttatctggagaataatattacatttaaatgtacaattcttg 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 497 attatgtatttcaaaaaatttatctagagaataatattacatttaaatgtacaattcttg 438
Query: 425 gtcaataaaagtatgccccaattctcttccatactatgaattacttgtgttttccccata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtcaataaaagtatgccccaattctcttccatactatgaattacttgtgttttccccata 378
Query: 485 caaacactggtttgcaaaatccagtatctctcacacaatag 525
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caaacactggtttgcaaaatccagtatctctcacacaatag 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_d19.g1 MSMg01no347_d19.g1 CHROMAT_FILE:
MSMg01no347_d19.g1 PHD_FILE: MSMg01no347_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:09 2005
(562 letters)
>mm_chr2_99944718_99945680
Length = 963
Score = 1058 bits (547), Expect = 0.0
Identities = 559/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Plus
Query: 1 tcctgatgtgaaaagatctactcatgaatccctgttgtcaggcttttcctagcctggact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgatgtgaaaagatctactcatgaatccctgttgtcaggcttttcctagcctggact 260
Query: 61 ttattagtacacaccaggacaggagacagaatgagcatttcctattttctattcctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattagtacacaccaggacaggagacagaatgagcatttcctattttctattcctcttt 320
Query: 121 tct-tatacttgctgtccatatttggactcagatattagatgagaaaagtactatactat 179
| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtatatatttgctgtccatatttggactcagatattagatgagaaaagtactatactat 380
Query: 180 aaggattcagaatattagaaaaaagaagagattaaacttatacaaagatgagcatatagg 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggattcagaataatagaaaaaagaagagattaaacttatacaaagatgagcatatagg 440
Query: 240 ataaaatagttttgtttgttgattatttgattggcttactgataactcatctcatactat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaaatagttttgtttgttgattatttgattggcttactgataactcatctcatactat 500
Query: 300 aacttgggataatctgaaatgcatagaagagttgacatgatatccaaagatttgtgtacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacttgggataatctgaaatgcatagaagagttgacatgatatccaaagatttgtgtacc 560
Query: 360 tcctgtcttagccttacttctgctggatgtacaaacacaagccttcacaccaagtgattg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctgtcttagccttacttctgctggatgtacaaacacaagccttcacaccaagtgattg 620
Query: 420 aaatttgaattatacaacatagttatccagattcaatgaatatccttttgttttttaatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatttgaattatacaacatagttatccagattcaatgaatatccttttgttttttaatc 680
Query: 480 actaaatataaatcctactaagctagttattatcaaagttgagaatatttctttctctga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actaaatataaatcctactaagctagttattatcaaagttgagaatatttctttctctga 740
Query: 540 agtatgttattagttctttaaga 562
|||||||||||||||||||||||
Sbjct: 741 agtatgttattagttctttaaga 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 963
Length adjustment: 10
Effective length of query: 552
Effective length of database: 953
Effective search space: 526056
Effective search space used: 526056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
