Query= MSMg01no347_h01.b1 MSMg01no347_h01.b1 CHROMAT_FILE:
MSMg01no347_h01.b1 PHD_FILE: MSMg01no347_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:25 2005
(421 letters)
>mm_chr2_90802934_90803754
Length = 821
Score = 656 bits (339), Expect = 0.0
Identities = 362/373 (97%), Gaps = 7/373 (1%)
Strand = Plus / Minus
Query: 50 acaaaccaac-aacaaaaaaaatttgtagtggctagagttggctcagtggttaagagtac 108
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 821 acaaaccaacaaaaaaaaaaaaattgtagtggctagagttggctcagtggttaagagtac 762
Query: 109 tggctgctcttccaaatatcctgagttcaattcaaagcaaccacatggtggctcacaacc 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tggctgctcttccaaatatcctgagttcaattcaaagcaaccacatggtggctcacaacc 702
Query: 169 atctgtaatgagatctggtaccttcttctggcatgcaggtgtacatgctgatagagcact 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atctgtaatgagatctggtaccttcttctggcatgcaggtgtacatgctgatagagcact 642
Query: 229 catacataaaataaataaaattttaaaaagagagaggagagagcaaaggcagacttttat 288
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 641 catacataaaataaataaaattttaaaaagagagaggagagagcaaaggtagacttttat 582
Query: 289 tccacggagcctacccactttcactaagttcacctacagtgtcttcaacatggggaaatg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tccacggagcctacccactttcactaagttcacctacagtgtcttcaacatggggaaatg 522
Query: 349 cagatttggaatacactgaagttcctctgttcctggatttggtttggttttttttttt-- 406
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 521 cagatttggaatacactgaagttcctctgttgctggatttggtttggttttttttttttt 462
Query: 407 ----ggggggggg 415
|||||||||
Sbjct: 461 tttaggggggggg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_h01.g1 MSMg01no347_h01.g1 CHROMAT_FILE:
MSMg01no347_h01.g1 PHD_FILE: MSMg01no347_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:25 2005
(513 letters)
>mm_chr2_90786493_90787405
Length = 913
Score = 977 bits (505), Expect = 0.0
Identities = 511/513 (99%)
Strand = Plus / Plus
Query: 1 attatgtcacctagattggccttaaacttatttgaatatattatcttatcctctctccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatgtcacctagattggccttaaacttatttgaatatattatcttatcctctctccca 260
Query: 61 agttggaaccttaggcttgagcccaccatgcctgattttctgagttgaatttctagcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttggaaccttaggcttgagcccaccatgcctgattttctgagttgaatttctagcagg 320
Query: 121 ctccagagttggctgctgttgatttacccactctttgcttgatatatcttggcacacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccagagttggctgctgttgatttacccactctttgcttgatatatcttggcacacaga 380
Query: 181 aacagccaacaggcaagtaaaatagaaacaagaaaagttggataaaaaacttctgtaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagccaacaggcaagtaaaatagaaacaagaaaagttggataaaaaacttctgtaatt 440
Query: 241 gagagttgatgttttttttttttttttgttttttcgagacagggtttctttgtatagccc 300
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 441 gagagttgatgttttttttttttttttggtttttcgagacagggtttctctgtatagccc 500
Query: 301 tggctgtcctggaactcacttggtagaccaggctagccttgaactcagaaatccacctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggctgtcctggaactcacttggtagaccaggctagccttgaactcagaaatccacctgc 560
Query: 361 ctctgccacccaagtgctgggataatgtttccttttttaaattgtagaatccttaatgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctgccacccaagtgctgggataatgtttccttttttaaattgtagaatccttaatgta 620
Query: 421 gaagcttaatggtttgaaaaagtggtgtgtcttgcatgggatgcagcttgagaggaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaagcttaatggtttgaaaaagtggtgtgtcttgcatgggatgcagcttgagaggaaagt 680
Query: 481 tgtgatagcctgacatgcagtatttataaattg 513
|||||||||||||||||||||||||||||||||
Sbjct: 681 tgtgatagcctgacatgcagtatttataaattg 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
