Query= MSMg01no348_c16.b1 MSMg01no348_c16.b1 CHROMAT_FILE:
MSMg01no348_c16.b1 PHD_FILE: MSMg01no348_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:22 2005
(550 letters)
>mm_chr2_135728115_135729064
Length = 950
Score = 1023 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 7 gaattcaatagtgtcccctgagaaaatattcaaattgatttagcttagtaatatttctcc 66
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaattcaatagtgtagcctgagaaaatattcaaattgatttagcttagtaatatttctcc 688
Query: 67 attcttcctatttcaaaaggtactctgtcaaataaaatttaatctccttttttcttgaaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 attcttcctatttcaaaaggtactctgtcaaataaaatttaatctccttttttcttgaaa 628
Query: 127 ggaattacagaaaactcagccagctgaataaaaaggagagtgggtgcatgggtacctaga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ggaattacagaaaactcagccagctgaataaaaaggagagtgggtgcatgggtacctaga 568
Query: 187 taacaggagtgtgtggggggatgggtgggtgtgcatgtgccttgtgtgtatggttacaca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 taacaggagtgtgtggggggatgggtgggtgtgcatgtgccttgtgtgtatggttacaca 508
Query: 247 tgtatgtatgtttgcatgcatgtgagattcaacagttgatgcctggagtttacattgact 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgtatgtatgtttgcatgcatgtgagattcaacagttgatgcctggagtttacattgact 448
Query: 307 gtttatatatagtgaggcaggggtttctgctgaacccagagtctgctaatttctcgagtc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 447 gtttatatatagtgaggcaggggtttctgctgaacccagagtctgctaatttctctagtc 388
Query: 367 tagctagccagcttaccttggagatgccccatttctgcttttcaagagtgggtgctgatg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tagctagccagcttaccttggagatgccccatttctgcttttcaagagtgggtgctgatg 328
Query: 427 aatcaaaacccttgggtagcaaaccctttccccactgagacatctccctagtcctataac 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aatcaaaacccttgggtagcaaaccctttccccactgagacatctccctagtcctataac 268
Query: 487 tttgatttcaaagtagactatagtatgtctttctttcctgccctcctttacatcagctat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttgatttcaaagtagactatagtatgtctttctttcctgccctcctttacatcagctat 208
Query: 547 c 547
|
Sbjct: 207 c 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_c16.g1 MSMg01no348_c16.g1 CHROMAT_FILE:
MSMg01no348_c16.g1 PHD_FILE: MSMg01no348_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:22 2005
(543 letters)
>mm_chr2_135531834_135532776
Length = 943
Score = 1029 bits (532), Expect = 0.0
Identities = 541/544 (99%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 1 ctggctagctggggctatatagagaggccctatttccaaaatttataaaaacaaaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ctggctagctggggctatatagagaggccctatttccaaaatttataaaaacaaaaaatc 259
Query: 61 caaacaacaacttaaaag-aaaaaaaaaaaaacgaaagacattggcaaataaactatgaa 119
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caaacaacaacttaaaagaaaaaaaaaaaaaacgaaagacattggcaaataaactatgaa 319
Query: 120 tataaagtaaaagaattttcactttaaataataatgatgatgatgatgatgatgatagta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 tataaagtaaaagaattttcactttaaataataatgatgatgatgatgatgataatagta 379
Query: 180 gtagtaggaaataataataataaaatagtaataatggcagtaatgtaaaacaaagcaatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtagtaggaaataataataataaaatagtaataatggcagtaatgtaaaacaaagcaatg 439
Query: 240 gtacaaaatttgtcagtactttacttataaatgtatagctattaagcacaggaagatgta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtacaaaatttgtcagtactttacttataaatgtatagctattaagcacaggaagatgta 499
Query: 300 aaacttaatcttaggacatgacatctattttaacttagtagagagaaatattttactctt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaacttaatcttaggacatgacatctattttaacttagtagagagaaatattttactctt 559
Query: 360 aggaagccagatttagtacagttaggttcaagtgttagttgtgttcagatacatagcatg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 560 aggaagccagatttagtacagttaggttcaagtattagttgtgttcagatacatagcatg 619
Query: 420 cttagttccattcctatcaaagcgaggggatctcacacagtgacttgggacagcctctgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttagttccattcctatcaaagcgaggggatctcacacagtgacttgggacagcctctgg 679
Query: 480 aagacctaacctgtctgctgtcacccacacattgcaggaaagctgcctcagcaccccttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagacctaacctgtctgctgtcacccacacattgcaggaaagctgcctcagcaccccttt 739
Query: 540 ccac 543
||||
Sbjct: 740 ccac 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
