Query= MSMg01no348_d19.b1 MSMg01no348_d19.b1 CHROMAT_FILE:
MSMg01no348_d19.b1 PHD_FILE: MSMg01no348_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:28 2005
(612 letters)
>mm_chr2_20489628_20490639
Length = 1012
Score = 920 bits (476), Expect = 0.0
Identities = 492/498 (98%), Gaps = 2/498 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatagtgttaaccattataaggatgatggtcacagggttgttacagaagatttg 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 ggaattcatagtgttaaccattataaggatgatggtcacagggttgttagagaagatttg 439
Query: 64 acagtctttaaaggaccagatgtacactgtggcatcatccaggtgatttttgtttccctg 123
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 438 acactctttaaaggaccagatgtacactgtggcatcatcccggtgatttttgtttccctg 379
Query: 124 aaagaagcattcgtacaaacaagtgtaaaaatcaatacaaccattacatatggttcaatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaagaagcattcgtacaaacaagtgtaaaaatcaatacaaccattacatatggttcaatg 319
Query: 184 taaaaactcctcaagcacagggaactgacgaaggtcataaccaaggcccttgaaaacggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 taaaaactcctcaagcacagggaactgacgaaggtcataaccaaggcccttgaaaacggt 259
Query: 244 tgaagccaacatggtagtaagttccggctgaactgatgtaagaaaagagttgactgggcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgaagccaacatggtagtaagttccggctgaactgatgtaagaaaagagttgactgggcc 199
Query: 304 agtgaaatggcttagtgggaaaaggtgcttgcttacaaaccgatgacatgagttcaatcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agtgaaatggcttagtgggaaaaggtgcttgcttacaaaccgatgacatgagttcaatcc 139
Query: 364 ctggtagaaggagagaagcaactctaagaagttgtcctccagcctacacgcatagacaca 423
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 138 ctggtagaaggagagaagcaactctaagaagttgtcctccagcctacatgcatagacaca 79
Query: 424 cacatacatgcatatgtacatgaacac--atgctagtcggacagacagacaaacagacag 481
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 78 cacatacatgcatatgtacatgaacacatatgctagtcggacagacagacaaacagacag 19
Query: 482 gagtaaaaagaaaaagga 499
||||||||||||||||||
Sbjct: 18 gagtaaaaagaaaaagga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_d19.g1 MSMg01no348_d19.g1 CHROMAT_FILE:
MSMg01no348_d19.g1 PHD_FILE: MSMg01no348_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:28 2005
(452 letters)
>mm_chr2_20357593_20358445
Length = 853
Score = 822 bits (425), Expect = 0.0
Identities = 446/453 (98%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 1 agtcctaattgtctgtgcattttcttctcagctgacgtcatgacattaaaaaacatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcctaattgtctgtgcattttcttctcagctgacgtcatgacattaaaaaacatccct 260
Query: 61 cttcttgtatagtcttaaaaacgaagggttggagttgatttcagtgagaagggtgttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcttgtatagtcttaaaaacgaagggttggagttgatttcagtgagaagggtgttgtt 320
Query: 121 ttggtttaaattactgtgaactaagtaacacactcaatacacaggtatccaaagcataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggtttaaattactgtgaactaagtaacacactcaatacacaggtatccaaagcataaa 380
Query: 181 tgagacggcatttaaaaactaaaatgtaacacattattacacagtttttaaaagtagaaa 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagaaggcatttaaaaactaaaatgtaacacattattacacagtttttaaaagtagaaa 440
Query: 241 ggaattgtaaagaaacctgagtgaaccatcagcctggtctccaccccagagaa-gcctgt 299
| ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 441 gaaattggaaagaaacctgagtgaaccatcagcctcgtctccaccccagagactgcctgt 500
Query: 300 ggcttccatcttcactgctgctttgcttggtttgaattttgctttttcatcttatttttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcttccatcttcactgctgctttgcttggtttgaattttgctttttcatcttatttttc 560
Query: 360 tgagacagggtcttactgtgtagaccaagctgaacttcaatttttgatcttcctggcttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagacagggtcttactgtgtagaccaagctgaacttcaatttttgatcttcctggcttc 620
Query: 420 cccttccacatactgagattatagacttgtatg 452
||| |||||||||||||||||||||||||||||
Sbjct: 621 cccctccacatactgagattatagacttgtatg 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space: 372606
Effective search space used: 372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
