Query= MSMg01no349_a15.b1 MSMg01no349_a15.b1 CHROMAT_FILE:
MSMg01no349_a15.b1 PHD_FILE: MSMg01no349_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:32 2005
(650 letters)
>mm_chr2_75229830_75230880
Length = 1051
Score = 911 bits (471), Expect = 0.0
Identities = 477/479 (99%), Gaps = 2/479 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgcattccctagcttactggaatgatagctgaag-acacattttgaaagtgcg 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 479 ggaattctgcattccctagcttactggaatgatagctgaagaacacattttgaaagtgcg 420
Query: 63 gtgctaaacaggatgggcagtcaatgtcgaatgtccacagctctgatgatggagactgct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtgctaaacaggatgggcagtcaatgtcgaatgtccacagctctgatgatggagactgct 360
Query: 123 ttatattgtgtagctatttttttcaaattggaaaacctctaggaggagggaggctcctaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttatattgtgtagctatttttttcaaattggaaaacctctaggaggagggaggctcctaa 300
Query: 183 gactcaagaacctaagggagttttcaaagttcaatgggtacaggaaattacaagactccc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gactcaagaacctaagggagttttcaaagttcaatgggtacaggaaattacaagactccc 240
Query: 243 aaggcccacctctgaggccgggagaggagactggggtgggcagcacgcaagctgtgcagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaggcccacctctgaggccgggagaggagactggggtgggcagcacgcaagctgtgcagg 180
Query: 303 gaactgcactgttggagctttggggaaccatcactc-aatgtggtgtgggctgctgtgtc 361
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 179 gaactgcactgttggagctttggggaaccatcactcaaatgtggtgtgggctgctgtgtc 120
Query: 362 gaaacaactctccatgagtcacctgggttcctgtaaacagactttcacccatgcttctgg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gaaacaactctccatgagtcacctgggttcctgtaaacagactttcacccatgcttctgg 60
Query: 422 taacttccatacacatactggtttgctcaacttgatggagatggaagtgtttctttggc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 taacttccatacacatactggtttgctcaacttgatggagatggaagtgtttctttggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1051
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1041
Effective search space: 666240
Effective search space used: 666240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_a15.g1 MSMg01no349_a15.g1 CHROMAT_FILE:
MSMg01no349_a15.g1 PHD_FILE: MSMg01no349_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:32 2005
(548 letters)
>mm_chr2_75084352_75085299
Length = 948
Score = 861 bits (445), Expect = 0.0
Identities = 457/461 (99%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 1 atttgcaaaacttgctaatttatgcaaatgatccttaacctgtcagtgcctggaatctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atttgcaaaacttgctaatttatgcaaatgatccttaacctgtcagtgcctggaatctat 259
Query: 61 ttcacactgctcctaggtcttggtagctttggagcctagatgggggaagccattactgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttcacactgctcctaggtcttggtagctttggagcctagatgggggaagccattactgca 319
Query: 121 gaatttgtcggtttgtaatcattatagtggctattgagttgttataa-ttttttttaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 320 gaatttgtcggtttgtaatcattatagtggctattgagttgttataattttttttttaaa 379
Query: 180 gtagcaccactatgaataaataaaaaatgtggttttaagtggaacagccagccaacacct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtagcaccactatgaataaataaaaaatgtggttttaagtggaacagccagccaacacct 439
Query: 240 aacactgaaatataataaaataaaaaattctagagattaaattaaagatggaattgaatg 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacactgaaataaaataaaataaaaaattctagagattaaattaaagatggaattgaatg 499
Query: 300 gaaagatctaatatccatgtctcctgacacccctgagtaatgttagaagctaatgacttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaaagatctaatatccatgtctcctgacacccctgagtaatgttagaagctaatgacttc 559
Query: 360 ttctcttgaagaaactaactggttaataatccaaacgggggctatcagctgctgacggag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttctcttgaagaaactaactggttaataatccaaacgggggctatcagctgctgacggag 619
Query: 420 gcagattcaccaagtaggcagataaggaacttcttt-tttt 459
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 620 gcagattcaccaagtaggcagataaggaacttctttatttt 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
