Query= MSMg01no349_i17.b1 MSMg01no349_i17.b1 CHROMAT_FILE:
MSMg01no349_i17.b1 PHD_FILE: MSMg01no349_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:11 2005
(637 letters)
>mm_chr2_77746345_77747381
Length = 1037
Score = 1226 bits (634), Expect = 0.0
Identities = 636/637 (99%)
Strand = Plus / Plus
Query: 1 aatacctaagattgagattaaacttatacttagatagttagtaacaaaacacaagtattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatacctaagattgagattaaacttatacttagatagttagtaacaaaacacaagtattg 260
Query: 61 acagaaggacaaatggccactttttcaatgtaagtgaccttctagttgatttttaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaaggacaaatggccactttttcaatgtaagtgaccttctagttgatttttaaaaat 320
Query: 121 gtaaaaaaataaaaataaaagaaaggaacaggtttatgattcaattttctaagtcttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaaaaaataaaaataaaagaaaggaacaggtttatgattcaattttctaagtcttgaa 380
Query: 181 ataaatgtttgactacagcctacctacaaggggatgaccattctatgtgtaagtccacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaatgtttgactacagcctacctacaaggggatgaccattctatgtgtaagtccacag 440
Query: 241 aagaatggacactatatacagacctatctacagagggaaatctaaggatgaatgggtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaatggacactatatacagacctatctacagagggaaatctaaggatgaatgggtcaa 500
Query: 301 tcctataactgctgaaatatattgttcaaccagctatttaactgctttgaaaaacctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcctataactgctgaaatatattgttcaaccagctatttaactgctttgaaaaacctttc 560
Query: 361 tgtgaaaatgttagcactaatgaataaactcctgataagaaaatctacaatcacaaatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgaaaatgttagcactaatgaataaactcctgataagaaaatctacaatcacaaatgg 620
Query: 421 ctgacatctaattaactgacaagtatggtttaataattcctgaaataattctaagggagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgacatctaattaactgacaagtatggtttaataattcctgaaataattctaagggagc 680
Query: 481 agacagcaattccatgaggaaatgattcaggtaatgtagcaagcagagacagaatgaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agacagcaattccatgaggaaatgattcaggtaatgtagcaagcagagacagaatgaggc 740
Query: 541 cactgtataagtacctttttctataaatctcttattagaatgtctacatttttacnaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 741 cactgtataagtacctttttctataaatctcttattagaatgtctacatttttacaaaca 800
Query: 601 cattagctagaacacattcattctctaagtacaaacg 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 cattagctagaacacattcattctctaagtacaaacg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_i17.g1 MSMg01no349_i17.g1 CHROMAT_FILE:
MSMg01no349_i17.g1 PHD_FILE: MSMg01no349_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:11 2005
(578 letters)
>mm_chr2_77929945_77930922
Length = 978
Score = 656 bits (339), Expect = 0.0
Identities = 359/373 (96%), Gaps = 12/373 (3%)
Strand = Plus / Minus
Query: 204 agacaagagggtttcagacattttctggctagttaaatctttctaaattgttgaacatca 263
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 978 agacaagagggtttcagatattttctggctagttaaatctttctaaattggtgaacatca 919
Query: 264 ggttcactgcgacaccttgtctcaaaaataagatggtgggctgatgggatagctcatttg 323
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 918 ggttcactgcgacaccttgtctcaaaaataagatggtgg------------gctcatttg 871
Query: 324 gtaagatgccaggctgccaagcctgataacttgagtttggtccctgcagatggaagagta 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gtaagatgccaggctgccaagcctgataacttgagtttggtccctgcagatggaagagta 811
Query: 384 gaaacaattgctaagaattgccttctgctctccatgtctcagtcaatggtcagtcaatag 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaaacaattgctaagaattgccttctgctctccatgtctcagtcaatggtcagtcaatag 751
Query: 444 ataaacaaaatataaatgtaagatatttaaataaaatgggaaacatagagtaagacattc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ataaacaaaatataaatgtaagatatttaaataaaatgggaaacatagagtaagacattc 691
Query: 504 aacattaaattctggcttcaattttcacatgtacatatgggctttaacacatgcatgcaa 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aacattaaattctggcttcaattttcacatgtacatatgggctttaacacatgcatgcaa 631
Query: 564 gtgctctgcacac 576
|||||||||||||
Sbjct: 630 gtgctctgcacac 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
