CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATGAATTTAACACCAATGTGTAACCAAGCAATATGGCTACTAGA
AACAAGAGTTCTAAACTTCAGTTTTCCAATTTACATAAGAAACACAATCA
GACCCATTGGATGTTGAGATGAGTCTAAAATTCTGGCAGGGTTCTAGATA
ACAGTGATCTTTATGGCTTATATGCACCATATACCCCATAACAAGGAGCT
GGAGAGTAAACCAGCTGTGTGTAAGCTGCATATGATGTTGGGGTTGTAAA
CTTTCTTAACTCCCTGACATTCTGAGAAACAGAGGTTTCTCTCTCTTTCA
TTACTTTTATCTGTCTCTTGGCAGTGCCTCAACTTAATGGAACAAACAAA
GACCCAAATCATATTAAAAGATCTGCTCAAAGAAGAGCTGGGCTATAAAG
ATGGAGGGAAATCAAACTGAGTAAAATATCAAAAGTGAGGTTGGAGGAGG
AAAGGAAAATTTGAATATGTGTTAGACACAAGAGCAAGGGAAATTACACC
TTTTTCTATTTACTTACCTCAGTATTTGCATAAGACCACAAGAGCTTCAA
GACTACTCTAGATACAAAAATTCCATCTGCTCACACCATGCTAATAAATG
GTATAATATATTTATGTAATCTATAAGCACAATCGTTATCATTGATACCA
ACTCTATTACTCAAATTT

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGTAGACTGTATCTTGTATATTC
TGAATGAGCTTTTTCTTTTCCTTTTCCTTTTTCTTTTCTTTTTCTTTCTT
TCTTTCTTTTTTATTTATTTTTATTTTTGCTAGTATCCACTTACTAGTGA
GTACATACCCTGCGTGTCTTTTTGGGTCTGGGTTACCTCACTCAGAATGA
TATTTTCTACATCCATCCATTTGCCTGCAAAAGTCAGGATGTCCTCATTT
TTAATGGCTGAGTAGTATTCCATTGTTTAAATGAACCACATTTTCTGTAT
CCATTCTGTCCTGGGACATCTAGGTTGTTTCCAGCTTCTGGCTATCACAA
ATAAGTTCATTATGAACATAGTGAAACAGGCGCCCCTGTGGCATTGTGGG
CATCTTTTGTGTATATTCCCAAGAGTGGTATTGCTGGATCTTCAGGTAAA
TCTATTTCCAATTTTCTGAGGAACCTCCAGATTGATTTCCAGAATGACTG
TACCAGTTTGCAATCCAACCAGTGATGGAAGAGTGTTCCTCTTTCTCCAT
ATCTTCTCCAACATGTGTTGTCACCTGAGGTTTTGATCTTAGCCATTCTG
ACTGAGGTCATTTTGATTTGCCTTTCTCTGATCACTAAGGACTTTGAACA
TTTCTTTAGGTGCTTCTCAGTCATTCAAGATT

Query= MSMg01no349_o05.b1 MSMg01no349_o05.b1 CHROMAT_FILE:
MSMg01no349_o05.b1 PHD_FILE: MSMg01no349_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:38 2005
         (645 letters)



>mm_chr2_67099213_67100256
          Length = 1044

 Score = 1139 bits (589), Expect = 0.0
 Identities = 631/645 (97%), Gaps = 1/645 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caatgtgtaaccaagcaatatggctactagaaacaagagttctaaacttcagttttccaa 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 caatgcgtaaccaagcaatatggctactagaaacaagagttctaaacttcagttttccaa 785

                                                                       
Query: 61  tttacataagaaacacaatcagacccattggatgttgagatgagtctaaaattctggcag 120
           |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 784 tttacataagaaacgcaatcagacccattgggtgttgagatgagtctaaaattctggcag 725

                                                                       
Query: 121 ggttctagataacagtgatctttatggcttatatgcaccatataccccataacaaggagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 724 ggttctagataacagtgatctttatggcttatatgcaccatataccccataacaaggtgc 665

                                                                       
Query: 181 tggagagtaaaccagctgtgtgtaagctgcatatgatgttggggttgtaaactttcttaa 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 664 tggagagtaaaccagctgtgtgcaagctgcatatgatgttggggttgtaaactttcttaa 605

                                                                       
Query: 241 ctccctgacattctgagaaacagaggtttctctctctttcattacttttatctgtctctt 300
           |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 604 ctccctgacattctgagaaacagaggtttctctctcttccatttcttttatctgtctctt 545

                                                                       
Query: 301 ggcagtgcctcaacttaatggaacaaacaaagacccaaatcatattaaaagatctgctca 360
           ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 544 ggcagtgcctcaacttaatggaacaaacaaaga-caaaatcatattaaaagatctgctca 486

                                                                       
Query: 361 aagaagagctgggctataaagatggagggaaatcaaactgagtaaaatatcaaaagtgag 420
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aagaagagctggactataaagatggagggaaatcaaactgagtaaaatatcaaaagtgag 426

                                                                       
Query: 421 gttggaggaggaaaggaaaatttgaatatgtgttagacacaagagcaagggaaattacac 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 425 gttggaggaggaaaggaaaatttgaatatgtgttagatacaagagcaagggaaattacac 366

                                                                       
Query: 481 ctttttctatttacttacctcagtatttgcataagaccacaagagcttcaagactactct 540
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 365 ctttttctatttacttacctcagtatttgcataagactacaagagcttcaagactactct 306

                                                                       
Query: 541 agatacaaaaattccatctgctcacaccatgctaataaatggtataatatatttatgtaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agatacaaaaattccatctgctcacaccatgctaataaatggtataatatatttatgtaa 246

                                                        
Query: 601 tctataagcacaatcgttatcattgataccaactctattactcaa 645
           |||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 245 tctataagcataatcgttatcattgaaaccaactctattactcaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space:   656590
Effective search space used:   656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)