TTTTTTGNTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXGCCGCGGAATTCCAGAACATCCCGGGCGACACAGAGAAACCCCAT
TTTGAAAAACCAAAAACTGAAAGCTATAGTGGTGCACACTTTTAATCCCA
GCACCAAGGAGGTAAAGACAGGTGGATCTGTGTGAGATTTAGGGCCAGCC
TGGTCTACATGAGTACCAGGACAGCCAGAGCTACATTGTGAGATCATGTC
TGGAAAAAAACAAAAAAATCAACCAAACAAACAAACAAAAAACACCAACA
AACCAAAACCAAGCCATTAAGTCCATATATGCTGTTTTTTTTTAGATATG
TAATCTTCTACCAGGAGCTATTACACTTCTTTAAAAAAACTTGTCCCATC
CCTTTAAAAAAAACCTGTCCCAGAGTCACCAGCTATCTGGCAGAAGCAGA
GATCAGCTGAGTACCTGCAGGGTGAGTGCACTCCAGAGTTCCATCTGTGA
GCTGTCAGCACGCAGGAATGCCTTTGGGTGACATAGCTGTCTTTGAGTTA
TTTCTGTTCCTGTGTAATACCCCAATACTGAGATACCCAGAAACCTGGGG
ACAAGGAACCCCTCTAGAAGCACACATTGAAACTGTTGTTATTTTGATGG
AAATAGCTGGGTCTTCATTTATACTCCTTATTAGTGGTATGGGAACCGGC
TCCACCTGTGGAAGTTGTTTCTACTCTCN

NAAANAACCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATTCCCACCACCACC
ATGGTGGCTCGTTAACTCTAGGTCCAGGTGAGCAAGAGCTCTCTTCTGGC
CTTTGTGGGCCTCAACCGTGGAAGGGAGGGAGGGAAGGATGATGGACAGA
CAGACAAGACAGCAGAGCTGGGGCTCTGTTGATGAGAGCTGGCGAACAAG
CACGGAGGCCTGGACGCTAATCCCAGCACCACACAAACTGAGCTTGGTGG
TACATAGCTACCAGAAGTTCACGACCATCCTCAAGTACACACACAGAACA
AGTTAGGGCCAGCCTGGGCTACGAGATGGGAAAATAAGTCAAAATGCACA
CACACCGGGAATGACAAGCCTTCAATTCCTAACAGTTTGTGATTACAACA
CGAGCAGGATCTGGCAGAAAGAACCCAGGACTGCCTACCGAGAATGTTCT
GGAGCCAAATCTTCATTCCCTGGTGTCGCCAGTGTGTGGTGTTCTACAGA
GGAAGGGAAACCACCCTGAGAGGCTGCTAGACAGAGAGACGACTACCCAG
GTTTGGTTATTGAATACGGATTTTTTACTGAAAAAATCATTTTCAAATTA
ACCTTCTTCTATGGTTCAACTCTTGTATTGAACCCTGTATTGGATAAGGA
CATTTTCTGTGAAAACGAGGTTTTAAAACCCCTTTTTGGTT

Query= MSMg01no350_i03.g1 MSMg01no350_i03.g1 CHROMAT_FILE:
MSMg01no350_i03.g1 PHD_FILE: MSMg01no350_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:27 2005
         (480 letters)



>mm_chr2_167123227_167124106
          Length = 880

 Score =  824 bits (426), Expect = 0.0
 Identities = 477/518 (92%), Gaps = 38/518 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattcccaccaccaccatggtggctcgttaactctaggtccaggtgagcaagagctctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aattcccaccaccaccatggtggctcgttaactctaggtccaggtgagcaagagctctct 222

                                                                       
Query: 61  tctggcctttgtgggcctcaaccgtggaagggagggagggaaggatgatggacagacaga 120
           ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 223 tctggcctttgtgggcctcaaccatggaagggagggagggaaggatgacggacagacaga 282

                                                                       
Query: 121 caagacagcagagctggggctctgttgatgagagctggcgaacaagcacggaggcctgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 caagacagcagagctggggctctgttgatgagagctggcgaacaagcacggaggcctgga 342

                                                                       
Query: 181 cgctaatcccagcaccacacaaactgagcttggtggtacatagctaccagaagttcacga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cgctaatcccagcaccacacaaactgagcttggtggtacatagctaccagaagttcacga 402

                                                                       
Query: 241 ccatcctcaagtacacacacagaacaagttagggccagcctgggctacgagatgggaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccatcctcaagtacacacacagaacaagttagggccagcctgggctacgagatgggaaaa 462

                                                                       
Query: 301 taagtcaaaatgcacacacaccgggaatgacaagccttcaattcctaacagtttgtgatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 taagtcaaaatgcacacacaccgggaatgacaagccttcaattcctaacagtttgtgatt 522

                                                                       
Query: 361 acaacacgagcaggatctggcagaaagaacccaggactgcc---------t--------- 402
           |||||||||||||||||||||||||||||||||||||||||         |         
Sbjct: 523 acaacacgagcaggatctggcagaaagaacccaggactgcccaccgagaatgttctggca 582

                                                                       
Query: 403 --------------------accgagaatgttctggagccaaatcttcattccctggtgt 442
                               ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 583 gaaagaacccaggactgcccaccgagaatgttctggagccagatcttcattccctggtgt 642

                                                 
Query: 443 cgccagtgtgtggtgttctacagaggaagggaaaccac 480
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cgccagtgtgtggtgttctacagaggaagggaaaccac 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)