NNTTCATAATTGCGGCGCTATACCATCACCACTCCAGAGACCCCCGGACT
TCTAAAAACTCTGACCAACATCAAAGAAATGCAAACGCAAAAGATCTAAC
TCAAACATCCAGCAATCTNGATACAATGAGAAGACAAACCCTAGGATAAT
AGTATAGATGAAAAGAAAATTTCAACTTAATGGCCCGAAATAATCTTTCC
CAAAATAATNAAAAAAATTTCCCACCCCGNCGAAAAAATTTTTGAACTGT
CAAAAGCCCCCAAAACTCCCAAAAAAGCGGAAAAAAAAAAAAATTCCCCC
CCCTTTTTTTTCGACCCCGAAAAAAAAAAAAGGCGCCCCTCAAAACCCGC
TCTATTTTATAAAACCCCCCCTATAAAAAAAAAACCCCCCCCTCTTATTT
TTTGGGGGGGGGTTTTTCTCCCACCAGCTCTCCTCTTTTTTTTTTTCCCC
CAAAAATTTTTTTTTTTCCCAAACAAAAAAACTCCTCCCCCTGTTTTTTT
TTCTCCCCCCCCCCCCCAAAAAAAAAAAAAAGCATTTCCCCCCCCCCCCC
CCTTTTTTTCCCCCCCCCCTCCTCTTTTTTTTTTTTTTTTTTNTTTTTTA
AAAAAAAAAAAAAATACTTTTTTTTTTTTTTAAAAAAAAATAAAACTCTC
TATCATTTTCTCCCTTCCTCCCCCCCCCCCCCTCCTTTTTCTTAAAAAAA
TAAAACAATTCTCCACCCCCTCCCTNCTCCCCAACCTTTCCTTTTTTTTT
CTTTTTTATAAAATTAATCACTTCTCCTTTCCTAAGCAAGGAAGGGGG

CCCACGATNNTTCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACTAACCTC
TTGCTAAGTACAGCCATTGTTTAAAAACTTAAAAACTACCAGCACAATTA
ATTTAACTACATTAAATACAACAAAAAAACATAGAGAAATTGCTCCTGCG
TACTGCACTTTACTAACTCTTATAATTTTTGATGTTGTTGTTGTCTAATG
CGTTTGGGTATTGGAAATACAGTTTGCTGGTGCTATTTTTATATATTGTT
TCTATTTTTGATCAAGTAATGGCATTTTTGTTAGCTTGAAATTCATGATA
AATGTATTTTTATTATGAATGTTGGTATAAACTACAAATCATGATTTTTG
TTGCTGTTGCTGTTATTGTAGGGATCCAGGTTTTTAAGTATATACCTGTA
AATGTTCTTCTGTGCACATCTCAAGAAATGGGGAAGTTACTTGGGTAGCT
GTTTCAGGTTAAATGTATCCTCACAGGTTCCTAGATTTGACCACGTGGCC
CTCATCAAATGTTAATGTTCAGGGATACTGGTGAAACTTGGGCACACATG
GTTCCGATTTGGCCAAATATATCCCTATCATGGGGCCTTGAAGATTATGT
GCCACCTCCTCCTTCCGGGTCCCCAATTAATTAGCTTCCCGGCATGAACC
TCCCCTTTTTTTTTCTTTAACCCCCCTGAACCCTTCGCN

Query= MSMg01no350_j02.g1 MSMg01no350_j02.g1 CHROMAT_FILE:
MSMg01no350_j02.g1 PHD_FILE: MSMg01no350_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:32 2005
         (444 letters)



>mm_chr2_7411933_7412776
          Length = 844

 Score =  745 bits (385), Expect = 0.0
 Identities = 427/441 (96%), Gaps = 2/441 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ctaacctcttgctaagtacagccattgtttaaaaacttaaaaactaccagcacaattaat 63
           ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 206 ctaacctgttgctaagtacag-cattgtttaaaaacttaagaactaccagcacaattaat 264

                                                                       
Query: 64  ttaactacattaaatacaacaaaaaaacatagagaaattgctcctgcgtactgcacttta 123
           |||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||
Sbjct: 265 ttaactacattaaatacaac-aaaagacatagagaaattgttcctgggtactgcacttta 323

                                                                       
Query: 124 ctaactcttataatttttgatgttgttgttgtctaatgcgtttgggtattggaaatacag 183
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 324 ctaactcttatagtttttgatgttgttgttgtctaatgcatttgggtattggaaatacag 383

                                                                       
Query: 184 tttgctggtgctatttttatatattgtttctatttttgatcaagtaatggcatttttgtt 243
           |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||
Sbjct: 384 tttgctggtgctatttttatatattgttcctatttatgatcaagtaatggcacttttgtt 443

                                                                       
Query: 244 agcttgaaattcatgataaatgtatttttattatgaatgttggtataaactacaaatcat 303
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agcttgaaattcatgacaaatgtatttttattatgaatgttggtataaactacaaatcat 503

                                                                       
Query: 304 gatttttgttgctgttgctgttattgtagggatccaggtttttaagtatatacctgtaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gatttttgttgctgttgctgttattgtagggatccaggtttttaagtatatacctgtaaa 563

                                                                       
Query: 364 tgttcttctgtgcacatctcaagaaatggggaagttacttgggtagctgtttcaggttaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 564 tgttcttctgtgcacatctcaagaaatggggaagttacttgggtagctgttgcaggttaa 623

                                
Query: 424 atgtatcctcacaggttccta 444
           |||||||||||||||||||||
Sbjct: 624 atgtatcctcacaggttccta 644


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space:   361956
Effective search space used:   361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)