Query= MSMg01no351_l08.b1 MSMg01no351_l08.b1 CHROMAT_FILE:
MSMg01no351_l08.b1 PHD_FILE: MSMg01no351_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:01 2005
(429 letters)
>mm_chr2_138878747_138879575
Length = 829
Score = 435 bits (225), Expect = e-126
Identities = 289/331 (87%), Gaps = 32/331 (9%)
Strand = Plus / Minus
Query: 131 ttattgtgtatattatatttattaaaattattaaatatattttaattatatatgaaatat 190
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 829 ttattgtgtatattatacttattaaaattattaaatatattttaatcatatatgaaatat 770
Query: 191 ttaatttacttatacattaatacaaaattatataaattaaatataattaaagtatataga 250
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ttaatttatttatacattaatacaaaattatataaattaaatataattaaagtatataga 710
Query: 251 agtattaaattatatatatgtatac--------------------------------ata 278
|||||| || |||||||||||||| |||
Sbjct: 709 tgtattatataatatatatgtatacatatatgtgtatatatatatatatatatatatata 650
Query: 279 tatacatacatatatatatttactatgtattaaataggacagaaaattggttgggcagaa 338
|||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 649 tatatatatatatatatatatactatgtattaaataggacagaaaattgattgggcagaa 590
Query: 339 aagagtatggatatgggagaagtagagaaaggaagtgaatgaatgtggtcaaaattcgac 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aagagtatggatatgggagaagtagagaaaggaagtgaatgaatgtggtcaaaattcgac 530
Query: 399 tatatgttatacaatatatatgttaaaaacc 429
|||||||||||||||||||||||||||||||
Sbjct: 529 tatatgttatacaatatatatgttaaaaacc 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_l08.g1 MSMg01no351_l08.g1 CHROMAT_FILE:
MSMg01no351_l08.g1 PHD_FILE: MSMg01no351_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:01 2005
(153 letters)
>mm_chr2_138751424_138751976
Length = 553
Score = 259 bits (134), Expect = 5e-74
Identities = 149/154 (96%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 aggggatctgttccctttatggagagacagctcccact-agctgaggtgagtgtatagga 59
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 201 aggggatctgttccctttatggagagacagctccca-tgagctgaggtgagtgtatagga 259
Query: 60 ttctgagttgcagataacattttatttcttgatcacatagtaggcttgtaaagtgcttag 119
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 260 ttctgagttgcagacaacattttatttcttgatcacatagtaggcttgcaaagtgcttag 319
Query: 120 ctgttaatttttccttaaacaagcacttttctcc 153
||||||||||||||||||||| ||||||||||||
Sbjct: 320 ctgttaatttttccttaaacaggcacttttctcc 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
