Query= MSMg01no352_a18.b1 MSMg01no352_a18.b1 CHROMAT_FILE:
MSMg01no352_a18.b1 PHD_FILE: MSMg01no352_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:26 2005
(373 letters)
>mm_chr2_116456400_116457172
Length = 773
Score = 659 bits (341), Expect = 0.0
Identities = 362/369 (98%)
Strand = Plus / Plus
Query: 5 ttgagagaagagttctttctgtcctccattctgtcttctgggtagaggaacatgatccct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttgagagaagagttctttctgtcctccattctgtcttctgggtagaggaacatgatccct 264
Query: 65 ataacagtcaggttaaaaccaaagcttggtttctttgactttaattatgggcataaaatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataacagtcaggttaaaaccaaagcttggtttctttgactttaattatgggcataaaatc 324
Query: 125 aaagggtgtagagctgtttggtgagaaagcattttatcttggattgtattagagtattct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagggtgtagagctgtttggtgagaaagcattttatcttggattgtattagagtattct 384
Query: 185 cttcatttataaggttttggagaacatggtctcttgttctccattagagtaatcaatggc 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 cttcatttataaggttttggagaacatggtctcttgttctccagtagagtaatcaatggc 444
Query: 245 tattataaatgttcaaggaaaaagaccatacagtggcatgtaatactttgttgacttaag 304
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagcagaaatgttcaaggaaaaagaccatacagtggcatgtaatactttgttgacttaag 504
Query: 305 agaagtgattttatcatctgaaggtcaaagtttatatttacaaactagtttcactaaata 364
||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 505 agaagtgattttatcatttgaaggtcaaagtttatacttagaaactagtttcactaaata 564
Query: 365 tatttttga 373
|||||||||
Sbjct: 565 tatttttga 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_a18.g1 MSMg01no352_a18.g1 CHROMAT_FILE:
MSMg01no352_a18.g1 PHD_FILE: MSMg01no352_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:26 2005
(297 letters)
>mm_chr2_116627904_116628601
Length = 698
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 1 tctgaagagcttaaagctatttacaattttttattacatcagataactagttgtacaact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 498 tctgaagagcttaaagctatttacaattttttattacatcagataactagttatacaact 439
Query: 61 t-atttattttgttagtcattcttagagtaagtaagcacaaaataaatttgtatggatgt 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 taatttattttgttagtcattcttagagtaagtaagcacaaaataaatttgtatggatgt 379
Query: 120 ttaaaaagtcatgtgatgctagacccacaccctgacattctgacttggaattcgaggaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttaaaaagtcatgtgatgctagacccacaccctgacattctgacttggaattcgaggaag 319
Query: 180 gctccaaagttcatgtttttacaacttcttacacgattttgatgggtaccttgtcctaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gctccaaagttcatgtttttacaacttcttacacgattttgatgggtaccttgtcctaag 259
Query: 240 tactcttgggatgggtatttaagaatttaagaagaatcaattactttctgtttttgaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tactcttgggatgggtatttaagaatttaagaagaatcaattactttctgtttttgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
