Query= MSMg01no352_m20.b1 MSMg01no352_m20.b1 CHROMAT_FILE:
MSMg01no352_m20.b1 PHD_FILE: MSMg01no352_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:28 2005
(250 letters)
>mm_chr2_145263185_145263833
Length = 649
Score = 437 bits (226), Expect = e-127
Identities = 244/250 (97%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 1 agtaaattttgtataattttataagaacaacgctttgtgcagacttagacagtgtaactt 60
||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||
Sbjct: 449 agtaaattttgtataattttataagaacaacactttgtgcagacatagacagtgcaactt 390
Query: 61 gcttgctaagagtgccattaagagtcatggaacaagttttacaaagtattttaaactggt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 389 gcttgctaagagtgccattaagagtcatggaacaa-ttttacaaagtattttaaactggt 331
Query: 121 gtgtgaaaaccaaggtgtgtgaaaattcgtagtgggaaaattccacgtcacattattgct 180
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 330 gtgtgaaaaccaaggtgtgggaaaattcgtagtgggaaaattccacgtcacgttattgct 271
Query: 181 gaaaagctttcagattggtgcttggatttgttcaaactgtctatgcacaaattcattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaaaagctttcagattggtgcttggatttgttcaaactgtctatgcacaaattcattttc 211
Query: 241 tgaatgttta 250
||||||||||
Sbjct: 210 tgaatgttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 649
Length adjustment: 9
Effective length of query: 241
Effective length of database: 640
Effective search space: 154240
Effective search space used: 154240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no352_m20.g1 MSMg01no352_m20.g1 CHROMAT_FILE:
MSMg01no352_m20.g1 PHD_FILE: MSMg01no352_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:29 2005
(360 letters)
>mm_chr2_145076157_145076917
Length = 761
Score = 683 bits (353), Expect = 0.0
Identities = 359/361 (99%), Gaps = 1/361 (0%)
Strand = Plus / Plus
Query: 1 tccaggctcctcctctctctactctcagtgctgggtgtacaggttgactatgcctggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaggctcctcctctctctactctcagtgctgggtgtacaggttgactatgcctggctc 260
Query: 61 ttacattggtgctggggattcaaacccaggtcctaatgcttatgcaacaaactcttgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacattggtgctggggattcaaacccaggtcctaatgcttatgcaacaaactcttgtcc 320
Query: 121 cactgagccatctctctggcattgaggctgcagttttcttaatgattcaaaaataatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactgagccatctctctggcattgaggctgcagttttcttaatgattcaaaaataatagc 380
Query: 181 tgttcatgttcctacatggagaaaattagaaactaatgtgatatactttt-aatttgtgt 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tgttcatgttcctacatggagaaaattagaaactaatgtgatatactttttaatttgtgt 440
Query: 240 caaacttttctgctgaattacttggatgggctaatatctgctataatagatttgaggcct 299
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 caaacttttctgctgaattacttggatgggctaatatctgctataacagatttgaggcct 500
Query: 300 ttcaccagccccaaatttctttttcaagcagatttctgctcccaaattggctttgttata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaccagccccaaatttctttttcaagcagatttctgctcccaaattggctttgttata 560
Query: 360 a 360
|
Sbjct: 561 a 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 761
Length adjustment: 9
Effective length of query: 351
Effective length of database: 752
Effective search space: 263952
Effective search space used: 263952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
