Query= MSMg01no352_o17.b1 MSMg01no352_o17.b1 CHROMAT_FILE:
MSMg01no352_o17.b1 PHD_FILE: MSMg01no352_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:38 2005
(400 letters)
>mm_chr2_33298866_33299668
Length = 803
Score = 748 bits (387), Expect = 0.0
Identities = 395/399 (98%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 5 gaattcactttgttgaccaggctggcctaaaactcagaaatccacctgcctctgcccccc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gaattcactttgtagaccaggctggcctaaaactcagaaatccacctgcctctgcccccc 535
Query: 65 aagtgctgggattaaaggcatatgccaccaccgccccggccacacacacaattttaaatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aagtgctgggattaaaggcatatgccaccaccgccccggccacacacacaattttaaatg 475
Query: 125 tcaaaacactgctacaaaatcagcaatgataaaaaaaa---aaataaacaaacaaaaacc 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 474 tcaaaacactgctacaaaatcagcaatgataaaaaaaaaataaataaacaaacaaaaacc 415
Query: 182 catccagttgactagcattatcactgaggacatgtcaaaccctctgcagtatgtatcaca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 catccagttgactagcattatcactgaggacatgtcaaaccctctgcagtatgtatcaca 355
Query: 242 gtatccagggtccattctgaggtttaaaaactcactcctttatcgtgttgttgttgttcc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gtatccagggtccattctgaggtttaaaaactcactcctttatcgtgttgttgttgttcc 295
Query: 302 gagacaggtttctctgtgtagtcctggctgtcctggaactcactctgtacacaggtcctt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gagacaggtttctctgtgtagtcctggctgtcctggaactcactctgtacacaggtcctt 235
Query: 362 taccgtcttacttactattgatttattttttttctctaa 400
|||||||||||||||||||||||||||||||||||||||
Sbjct: 234 taccgtcttacttactattgatttattttttttctctaa 196
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 803
Length adjustment: 9
Effective length of query: 391
Effective length of database: 794
Effective search space: 310454
Effective search space used: 310454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_o17.g1 MSMg01no352_o17.g1 CHROMAT_FILE:
MSMg01no352_o17.g1 PHD_FILE: MSMg01no352_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:38 2005
(411 letters)
>mm_chr2_33175309_33176115
Length = 807
Score = 735 bits (380), Expect = 0.0
Identities = 401/410 (97%), Gaps = 4/410 (0%)
Strand = Plus / Plus
Query: 1 aaatctccaaaaggctgagcccaccaggcaaaacccctctttttttctttgggaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatctccaaaaggctgagcccaccaggcaaaacccctctttttttctttgggaaaagtg 260
Query: 61 accactgagcacccagtagacactgctcctgagctgtcctgtcctgagtcagtcagaaaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accactgcgcacccagtagacactgctcctgagctgtcctgtcctgagtcagtcagaaaa 320
Query: 121 cactgtgccaagatgcttgccctcactgggtattggcccttctccactcagtcaggacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 cactgtgccaagatgcttgccctcactgggtattggcccttctccactcag----gacag 376
Query: 181 atcccctgagcagctgctactccaggtactgagattacaccagggcctcttggaatacag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 377 atcccctgagcagctgctactccaggtactgagattacaccagggcctcttggagtacag 436
Query: 241 acctccaaaaaccagctgcctgtgaccgccttcttctgaaaaccttagaggcaaagaaaa 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 437 acctccaaaaaccagctgcctgtgaccaccttcttctgaaaaccttagaggcaaagaaaa 496
Query: 301 gatggaaggcccaacccatcaagaggtgtaagagggaggagggagagacaaccagaagaa 360
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 497 gatggaaggcccaacccatcaagaggtgtgagaggaaggagggagagacaaccagaagaa 556
Query: 361 agggaacactgcaaacagaaccacaaagtgggaaacttgaacctgcagtc 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agggaacactgcaaacagaaccacaaagtgggaaacttgaacctgcagtc 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 807
Length adjustment: 9
Effective length of query: 402
Effective length of database: 798
Effective search space: 320796
Effective search space used: 320796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
