Query= MSMg01no355_d10.b1 MSMg01no355_d10.b1 CHROMAT_FILE:
MSMg01no355_d10.b1 PHD_FILE: MSMg01no355_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:36 2005
(602 letters)
>mm_chr2_144099549_144100550
Length = 1002
Score = 1112 bits (575), Expect = 0.0
Identities = 593/599 (98%)
Strand = Plus / Minus
Query: 4 ggaattcaagttatgagaggaactgttctactcctgtattcttagtcctgctgaaattat 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ggaattcaagttaggaggggaactgttctactcctgtattcttagtcctgctgaaattat 734
Query: 64 ctgcatgtgaaaggcttaaaagaaatttaaccctgctggaattaaaatttaaagagatgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ctgcatgtgaaaggcttaaaagaaatttaaccctgctggaattaaaatttaaagagatgc 674
Query: 124 cgtgttagcctacagactacttaatgaatcagaagacaaacttgttaaacacaggaggaa 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 673 cgtgttagcctacagactacttaatgaatcagaagacaaacttgttaaaaacaggaggaa 614
Query: 184 cccaagtagcagagtacttgcctagcatacacaaggctgagtttaaccactaacactatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cccaagtagcagagtacttgcctagcatacacaaggctgagtttaaccactaacactatc 554
Query: 244 taataataaaaaaaattactgcacccattgccatgcagtttaattcccagctacagacct 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aaataataaaaaaaattactgcacccattgccatgcagtttaattcccagctacagacct 494
Query: 304 ctcctggctagattcttcacatgtgtaactacgaacatctagatttgtggaccctgtgta 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 493 ctcctggctagattcttcacatgtgtaactacgaacatctagatttgtggaccccgtgta 434
Query: 364 ctcaggatcagaggcaggcagatctctgagttagaggccatcctggtttctagagttcca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctcaggatcagaggcaggcagatctctgagttagaggccatcctggtttctagagttcca 374
Query: 424 ggacagccagggcaacaaagggaaaccctgtctcaaaaaacaagcaagcaaacaaacaac 483
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 373 ggacagccagggcaacaaagggaaaccttgtctcaaaaaacaagcaagcaaacaaacaac 314
Query: 484 cgaaaaggagagcagagactagttgagtggttgtcactacccatcttaggaaggcactca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cgaaaaggagagcagagactagttgagtggttgtcactacccatcttaggaaggcactca 254
Query: 544 atccagcatgcaatccttgcccctcccatctgaagaatgatatgaagttgtgagtgctt 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atccagcatgcaatccttgcccctcccatctgaagaatgatatgaagttgtgagtgctt 195
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_d10.g1 MSMg01no355_d10.g1 CHROMAT_FILE:
MSMg01no355_d10.g1 PHD_FILE: MSMg01no355_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:36 2005
(434 letters)
>mm_chr2_143912452_143913286
Length = 835
Score = 779 bits (403), Expect = 0.0
Identities = 427/435 (98%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 1 ttttagggggaaatggctgttagagcccaaatgtgttctctaaatcttctctgaagatgt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttggggggaaatggctgttagagcccaaatgtgttctctaaatcttctctgaagatgt 260
Query: 61 gtatgtggtggctaagctatgcaatatggtctttataaacaaaacgagaccaaaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatgtggtggctaagctatgcaatatggtctttataaacaaaacgagaccaaaaaaaaa 320
Query: 121 aaattctaatgttcacacagaaagaacaggactcctccgcagttcgatgagtttccagaa 180
|||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||
Sbjct: 321 aaattctaatgttcacacagaaagcacaggactcctcagtagttcgatgagtttccagaa 380
Query: 181 gcaaacactcccc-gggtagcggtctaggggcgacacatccaggtaagctctgtttagat 239
|||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaatcactccccggggtatcagtctaggggcgacacatccaggtaagctctgtttagat 440
Query: 240 caacagactacccctggccacccacgtcctcatagacccctctcagagtctgcttcccac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacagactacccctggccacccacgtcctcatagacccctctcagagtctgcttcccac 500
Query: 300 actatgctgacacgcagcagctgagactgggctagactgctcttgaacttggggctcatg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actatgctgacacgcagcagctgagactgggctagactgctcttgaacttggggctcatg 560
Query: 360 tgttctcccgtgtctggcttctctcagtgtgaggcatgttattgcagtagcaacagttcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttctcccgtgtctggcttctctcagtgtgaggcatgttattgcagtagcaacagttcc 620
Query: 420 gggttttgtttggtt 434
|||||||||||||||
Sbjct: 621 gggttttgtttggtt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
