GTCCTCATGTCACTATACGACTCACTATATTCGAGAGGATCCGCGGAATT
CTTTGTTTTTTCCTGTACCCCATTTTCAAAAGGGTTATTTGGTTTTCTGG
AGTCCAGCTTCTTGAGTTCTTTATATATATTGGATATTAGATCCTGTTGG
ATTTAGGATTGGTAAGGATCTTTTCCCAATCTGTTGGCTGCTGTTTTGTC
CTATTCACAGTGCTCTTTGCCTTACAGAAGCTTTGCAATTTTGTGACATC
CCATTTGTCGATTCTTGATCTTACAGCATAAGCCATTGCTGTTCTGTTCA
GGAATTTTATAATTAAATAATTGTAATTCATGTAATTTAACCATTAGTGC
CATATCTAGTGTCTATGTATATGATTATATACAATGTGTATTAAACCCAT
GTCATGAGCCAGATAATATTTATCATTTATAAATGGTTTTCATTTATTTT
TATTAGATATTTTCTTTATTTATATTTCAAATGTCATCCCCTTTCCTATT
TTCCCCTCCAAAAATTCCCTATCCTCTCCCCCTCGCCCCCCCTTCCTGCT
CTCCAACCCACCTACTCTCACTTCCTGGCACAGCCATTCCCCTATACTGG
GGCATATAACTTTCACAGGACCAAGGACCCAAGATATGACCTTTTGCCAT
ATCTTTTTTATTTACTTGAACTTATCATACTTGCGCCCCAGATAAGTTGA
CTTATTGTATATTATCCTGTGTAGAATCATAAATTTTTGTAACGATAATT
ATTCATTTCTGN

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGAAAAATAACGAATAGCAGAGAA
GCACCTGAAAAAATGTTCAACACCCTTAATCATCAGGGAAATGCAAATCA
AAACAACCCTGAGATTCCACCTCACACTGGTCACTTGATCTTTAACAAAA
GAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTACACAAATGGTGC
TGGCACAATTGGTTGTTATCATGTAGAAGAATGTGAATAGATCCATTCCT
ATCTCCTTGTACTAAGGTTAAATCTAAGTGGATCAAGGAACTCCACGTAA
AACCAGAGACAGTGAAACCTATAGAGGAGAAAGTGGGGAAAAGCCTTGAA
ATTATGCGCACAGGGAAAAAATTCCTGAATAGAAGAGCAATGGCTTGTGC
TGTAAGATCGAGAATGGACAAATGGGACCTCATAAAATTGCAAAGCTTCT
GTAAGGCAAAAGACATTGTCAATAAGACAAAAAGGCCACCAACAGATTGG
GAAAGGATCTTTACCTATCCGAAATCAGATAGGGGACTAATATCCAATAT
ATAAAAAGAATTCCAGAACGTGGACTCCAGAAAATCAAATAACCCCATTA
TAAATGGGGCTCAGAGCCTAACAAAGAATTCTCACCTGAGGAATAACCGA
ATGGCTGAGAAGCACCTGTAAAAATGTTGAGCATTCTTAATCCTCAGGAA
AAGGCAATCAAAGTAAACCCTGATT

Query= MSMg01no355_k07.b1 MSMg01no355_k07.b1 CHROMAT_FILE:
MSMg01no355_k07.b1 PHD_FILE: MSMg01no355_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:09 2005
         (514 letters)



>mm_chr2_66737858_66738771
          Length = 914

 Score =  940 bits (486), Expect = 0.0
 Identities = 507/514 (98%), Gaps = 1/514 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccattttcaaaagggttatttggttttctggagtccagcttcttgagttctttatatata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ccattttcaaaagggttatttggttttctggagtccagcttcttgagttctttatatata 753

                                                                       
Query: 61  ttggatattagatcctgttggatttaggattggtaaggatcttttcccaatctgttggct 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 752 ttggatattagatcctgttggatttaggattggtaaagatcttttcccaatctgttggct 693

                                                                       
Query: 121 gctgttttgtcctattcacagtgctctttgccttacagaagctttgcaattttgtgacat 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 692 gctgttttgtcctattcacagtgttctttgccttacagaagctttgcaattttatgacat 633

                                                                       
Query: 181 cccatttgtcgattcttgatcttacagcataagccattgctgttctgttcaggaatttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cccatttgtcgattcttgatcttacagcataagccattgctgttctgttcaggaatttta 573

                                                                       
Query: 241 taattaaataattgtaattcatgtaatttaaccattagtgccatatctagtgtctatgta 300
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 572 taattaaataattgtaattcgtgtaatttaaccattagtgccatatctagtgtctatgta 513

                                                                       
Query: 301 tatgattatatacaatgtgtattaaacccatgtcatgagccagataatatttatcattta 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 512 tatgattatatacaatgtgtattaaacccatgtgatgagccagataatatttatcattta 453

                                                                       
Query: 361 taaatggttttcatttatttttattagatattttctttatttatatttcaaatgtcatcc 420
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taaatggttttcattta-ttttattagatattttctttatttatatttcaaatgtcatcc 394

                                                                       
Query: 421 cctttcctattttcccctccaaaaattccctatcctctccccctcgcccccccttcctgc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 393 cctttcctattttcccctccaaaaattccctatcctctccccctcgccccctcttcctgc 334

                                             
Query: 481 tctccaacccacctactctcacttcctggcacag 514
           ||||||||||||||||||||||||||||||||||
Sbjct: 333 tctccaacccacctactctcacttcctggcacag 300


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)