XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGGAAGAGTTCACAGAGAAACATTCAAGTTTCTCAAACGCCAGAGTCTGG
CTTTCAATTTTGTCATTTTTATTGAAAAATGATCTGTGTTTTGAAATCAA
AAGGACTCACTATAAAACTCACTTTCCTCCCACCAAGAAACTAGATCTGT
TTCCTGATGTGTTTGCTAAGTATACATTCAAAAGTTAAAAATTCATATTT
TCTTCATATAACTACTTAAACAATATCTGCCTCTCATACTACAGATAGTT
GAGCTAGAAATTTATTTCAAAAGTAGCATGTCACTGGCTACCATCTGAAA
TATTAACATACAACTTGTAATCCTATCTAGTATTGAAGAAATTCATGTTG
TCTCACTACGATTTTTAAATATGTTCTTCCCAAGTCAAATGTTTGTTAAA
TTACATTATACTTAATTGATATTATCATCATTGTTAAATTTTCACTTTTT
AAAAATAATATAAAGATTAAAAATCTTACAAAATCCAGTCTCTTATGAAA
TACAACTATTTCCATGTAGAATCAGATCTTTCCCATACTTATTTTCTCAT
GGTGCATAAATGCATAACTTTTGGATGACTGAGAACTTACTATATGCACA
TTTCCTTTTTCTATTTAATTTGGTACACAATCATTTTAATAACTACATAT
AAACCAGTTGCATGTTTTTGACATGAGTCTAGAATGCTACATTGAA

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGCATTATGCTGTTAAATGTTATGAATGTT
TTCCCTTCCTGTATGTCTGTTGTTTTTGTGTGCTTACCTTGTAGCTCTAA
AGGGTAGAAGAAGACATCAGATCCCTTGGAACTGGGATTACAGATTATTG
TGAGCAGCCATGTGGGTGATGGAAAATTTACTCAATACATCTTGAAAAGC
AGAGAGTGCTCTTCACCTCTGAACCATCTCACCAGCTCTGCTCTGGGTTT
TCTATTTGCCCTTTGCATTCTTGCTCCTCACATTCACTTTTTTTTTTTTT
TTTTTACTTTTTACTTTTTTGTCTAGGTTCTGGATTGATTTTTCCCATTT
TATTCAGATGATTATTTGAACCATCTATGTTGTCACTAATCATATGACTC
ACTGGATGTTAAGTACCTGTTGCTATGCAAAGGTCCTGCTTCAGCCCGAA
GAACATCCTCTTAAATGGATGGGGGATTGGGAGTTGATTCTTTGATCCAT
TCCTTTTTGCTCATACACTGTCCCTTCTAGCGTTTTCCCCTTTTCTGATG
GATTCTCTTCATACCCCCTTCCTCTTGTGTTTTTTTCCCTTTTTTTCTTC
ACCACTCCGTGGTTTTTTTCTCTATCACTCCGTATTCTCTCCCCTCTTTT
TTTTCGCCTCTTCCTCTCTCCTTTTTTCTCTTTCCACTACTTTTCCCTCC
CCCGCTTCCCC

Query= MSMg01no356_a12.b1 MSMg01no356_a12.b1 CHROMAT_FILE:
MSMg01no356_a12.b1 PHD_FILE: MSMg01no356_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:38 2005
         (654 letters)



>mm_chr2_108020670_108021723
          Length = 1054

 Score = 1210 bits (626), Expect = 0.0
 Identities = 644/650 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaggaagagttcacagagaaacattcaagtttctcaaacgccagagtctggcttt 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggaagagctcacagagaaacattcaagtttctcaaacgccagagtctggcttt 264

                                                                       
Query: 65  caattttgtcatttttattgaaaaatgatctgtgttttgaaatcaaaaggactcactata 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caattctgtcatttttattgaaaaatgatctgtgttttgaaatcaaaaggactcactata 324

                                                                       
Query: 125 aaactcactttcctcccaccaagaaactagatctgtttcctgatgtgtttgctaagtata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaactcactttcctcccaccaagaaactagatctgtttcctgatgtgtttgctaagtata 384

                                                                       
Query: 185 cattcaaaagttaaaaattcatattttcttcatataactacttaaacaatatctgcctct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattcaaaagttaaaaattcatattttcttcatataactacttaaacaatatctgcctct 444

                                                                       
Query: 245 catactacagatagttgagctagaaatttatttcaaaagtagcatgtcactggctaccat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catactacagatagttgagctagaaatttatttcaaaagtagcatgtcactggctaccat 504

                                                                       
Query: 305 ctgaaatattaacatacaacttgtaatcctatctagtattgaagaaattcatgttgtctc 364
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 ctgaaatattaacatacaacttgtaatcctatctagtattggagaaattcatgttgtctc 564

                                                                       
Query: 365 actacgatttttaaatatgttcttcccaagtcaaatgtttgttaaattacattatactta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actacgatttttaaatatgttcttcccaagtcaaatgtttgttaaattacattatactta 624

                                                                       
Query: 425 attgatattatcatcattgttaaattttcactttttaaaaataatataaagattaaaaat 484
           ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 625 attgacattaacatcattgttaaattttcactttttaaaaataatatagagattaaaaat 684

                                                                       
Query: 485 cttacaaaatccagtctcttatgaaatacaactatttccatgtagaatcagatctttccc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttacaaaatccagtctcttatgaaatacaactatttccatgtagaatcagatctttccc 744

                                                                       
Query: 545 atacttattttctcatggtgcataaatgcataacttttggatgactgagaacttactata 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atacttattttctcatggtgcataaatgcataacttttggatgactgagaacttactata 804

                                                             
Query: 605 tgcacatttcctttttctatttaatttggtacacaatcattttaataact 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgcacatttcctttttctatttaatttggtacacaatcattttaataact 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)