Query= MSMg01no357_a12.b1 MSMg01no357_a12.b1 CHROMAT_FILE:
MSMg01no357_a12.b1 PHD_FILE: MSMg01no357_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:55 2005
(554 letters)
>mm_chr2_65168901_65169857
Length = 957
Score = 1017 bits (526), Expect = 0.0
Identities = 546/554 (98%), Gaps = 3/554 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaaagatacactgtctttcacaacatttgatacacccaaatgtaaatgcatat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaaagatacactgtctttcacaacatttgatacacccaaatgtaaatgcatat 263
Query: 64 ttcactggttcaaaattgaaaagggggggg---caatttcaggaatggacattaacttta 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 ttcactggttcaaaattgaaaagggggggggggcaatttcaggaatggacattaacttta 323
Query: 121 ttttcaaaccaagaaataaactatatatatcttatgctagttcttatggagactccgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttcaaaccaagaaataaactatatatatcttatgctagttcttatggagactccgttt 383
Query: 181 gttttcagaagtctatgaagaaaggcaggactctattctcagatcatatgccagcacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttttcagaagtctatgaagaaaggcaggactctattctcagatcatatgccagcacata 443
Query: 241 cttgctgaacacagcattcgggcctctttatttcctgaacataacatggttaaatgtgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttgctgaacacagcattcgggcctctttatttcctgaacataacatggttaaatgtgca 503
Query: 301 cacagcagttgccttttttgaattaaaccaattagaaaatcagacggaagccacacgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cacagcagttgccttttttgaattaaaccaattagaaaatcagacggaagccacacgctt 563
Query: 361 tacgacactgtttcagaggagcttgtttttattaaagagtgaggagtcgcacaccctcct 420
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 564 tatgacactgtttcagaggagcttgtttttattaaagagtgaggagttgcacaccctcct 623
Query: 421 tttgagacctgctttaagtggccatgttcttcccctccaccagtgacaccagatgtgtgt 480
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 624 tttgagacatgctttaagtggccatgttcttcccctccaccaatgacaccagatgtgtgt 683
Query: 481 tgcccttctgctcccccttctggtcagaaaaagatgacagcacaaagcagtagtggcaga 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tacccttctgctcccccttctggtcagaaaaagatgacagcacaaagcagtagtggcaga 743
Query: 541 caccaagcttcagt 554
||||||||||||||
Sbjct: 744 caccaagcttcagt 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 957
Length adjustment: 10
Effective length of query: 544
Effective length of database: 947
Effective search space: 515168
Effective search space used: 515168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_a12.g1 MSMg01no357_a12.g1 CHROMAT_FILE:
MSMg01no357_a12.g1 PHD_FILE: MSMg01no357_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:56 2005
(417 letters)
>mm_chr2_65336533_65337349
Length = 817
Score = 783 bits (405), Expect = 0.0
Identities = 414/417 (99%)
Strand = Plus / Minus
Query: 1 tgcgacttctgtacttggagctgctcaagtgttgctctctgttcccctccaggtcttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgcgacttctgtacttggagctgctcaagtgttgctctctgttcccctccaggtcttcac 558
Query: 61 tgggatcttcacagccgagatggtcctgaaaatcattgcaatggatccctattactattt 120
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 557 cgggatcttcacagccgagatggtcctgaaaatcatcgcaatggatccctattactattt 498
Query: 121 ccaagagggctggaatatctttgatggaattattgttagcctgagtttaatggagcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ccaagagggctggaatatctttgatggaattattgttagcctgagtttaatggagcttgg 438
Query: 181 cctggcaaatgtggaggggctgtccgtgcttcggtccttcagactggtatcttctgctct 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cctggcaaacgtggaggggctgtccgtgcttcggtccttcagactggtatcttctgctct 378
Query: 241 catctctcatgagcatagcatttatttttaaatgtgtgtttataatgtgtattatagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 catctctcatgagcatagcatttatttttaaatgtgtgtttataatgtgtattatagttc 318
Query: 301 atgaaatagcgtttttaatcacacaagtcaatatccccaggaaacgaacaaccatttaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atgaaatagcgtttttaatcacacaagtcaatatccccaggaaacgaacaaccatttaag 258
Query: 361 gctaccacgataagtgtaatctgttttctagaataataaaaatgattgatatattcc 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gctaccacgataagtgtaatctgttttctagaataataaaaatgattgatatattcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
