Query= MSMg01no357_e01.b1 MSMg01no357_e01.b1 CHROMAT_FILE:
MSMg01no357_e01.b1 PHD_FILE: MSMg01no357_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:12 2005
(427 letters)
>mm_chr2_166098183_166099008
Length = 826
Score = 673 bits (348), Expect = 0.0
Identities = 372/380 (97%), Gaps = 1/380 (0%)
Strand = Plus / Minus
Query: 48 cctggttaaagatagaacgtattatccgtccgggctggagaggtggctcagcagttaaaa 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cctggttaaagatagaacgtattatccgtccgggctggagaggtggctcagcagttaaaa 767
Query: 108 ggctggctgcccttccagaggacctaggttcgattcccagtactcacagggcagcccatt 167
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 766 ggctggctgcccttccagaggacccaggttcgattcccagtactcacagggcagcccatt 707
Query: 168 tccaggggatctaatgccctcttcagccaccagacacgcatgtggtgcacagatgcacat 227
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 706 tccaggggatctaatgccctcttcagccaccagacacgcgtgtggtgcacagatgcacat 647
Query: 228 gcaggcactcatacacgcaattattttattaagagaaagtattgtcacatcataattata 287
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 646 gcaggcactcatacacgcaattattttaaaaagagaaagtattgtcacatcataattata 587
Query: 288 catgctatatgcgtatgattatgcatttagtgtgtagaattataattttaatcttgctgg 347
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 586 catgctatatgtgtatgattatgcatttagt-tgtagaattataattttaatcttgctgg 528
Query: 348 tgggtgatctcttaaaatcctaatttgagaatcttaactggccaaaaagcctgtgaacca 407
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 527 tgggtgatctcttaaaatcctaatttgagaatcttaactggccaaaaagcctgtgagcca 468
Query: 408 acccggagagatgctgccca 427
|||| |||||||||||||||
Sbjct: 467 acccagagagatgctgccca 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 826
Length adjustment: 9
Effective length of query: 418
Effective length of database: 817
Effective search space: 341506
Effective search space used: 341506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_e01.g1 MSMg01no357_e01.g1 CHROMAT_FILE:
MSMg01no357_e01.g1 PHD_FILE: MSMg01no357_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:12 2005
(436 letters)
>mm_chr2_165893441_165894274
Length = 834
Score = 816 bits (422), Expect = 0.0
Identities = 432/436 (99%), Gaps = 2/436 (0%)
Strand = Plus / Plus
Query: 1 tgggactgcctctgaccctgcacaggaaggacgctcactgggcagcgtttggaagccacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggactgcctctgaccctgcacaggaaggacgctcactgggcagcgtttggaagccacg 260
Query: 61 ggtgtaaagaaccgcttgtgtatactaccctttagttacagagagggcactctgtgttct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ggtgtaaagaaccgcttgtgtatactaccctttagttacagagagggcactc--tgttct 318
Query: 121 ttcttgtccatagctggtgtatcgtgagatgctatgaaatgaagttaattgtgtgtctct 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcttgtccatagctggtgtattgtgagatgctatgaaatgaagttaattgtgtgtctct 378
Query: 181 tggctaccagcaggctttctttaatgcccaaatggctgcccagcagaaacgagagctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tggctaccagcaggctttctttaatgcccaaatggctgcccagcagaaacgagagctgat 438
Query: 241 gagccatcatctgcagcagcagaggatggcgatgatgatgtcacaaccacagcctcaggc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gagccatcacctgcagcagcagaggatggcgatgatgatgtcacaaccacagcctcaggc 498
Query: 301 cttcagcccacctcccaacgtcaccgcctcccccagcatggacggggttttggcaggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttcagcccacctcccaacgtcaccgcctcccccagcatggacggggttttggcaggttc 558
Query: 361 agcaatgccgcaagcccctccacaacagtttccatatccagcaaattacggtaaacctgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agcaatgccgcaagcccctccacaacagtttccatatccagcaaattacggtaaacctgt 618
Query: 421 cagattgtgcccttat 436
||||||||||||||||
Sbjct: 619 cagattgtgcccttat 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 834
Length adjustment: 9
Effective length of query: 427
Effective length of database: 825
Effective search space: 352275
Effective search space used: 352275
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
