Query= MSMg01no357_g16.b1 MSMg01no357_g16.b1 CHROMAT_FILE:
MSMg01no357_g16.b1 PHD_FILE: MSMg01no357_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:24 2005
(454 letters)
>mm_chr2_147778297_147779150
Length = 854
Score = 870 bits (450), Expect = 0.0
Identities = 450/450 (100%)
Strand = Plus / Minus
Query: 5 gaattcctttatagcttctcgttatagctccccctgttagatttgtggccagtgccaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gaattcctttatagcttctcgttatagctccccctgttagatttgtggccagtgccaaat 595
Query: 65 gtctcacatcagttgattctgggggtggggaagggcattattttgctgagcctctcagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gtctcacatcagttgattctgggggtggggaagggcattattttgctgagcctctcagct 535
Query: 125 caaggtctccctggaagctctcacttgcaggacagatagcaagcataaggaagatcattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 caaggtctccctggaagctctcacttgcaggacagatagcaagcataaggaagatcattt 475
Query: 185 atagaactcatcagagtagctcatagattccagtttcttgttctctggtgcacaagatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atagaactcatcagagtagctcatagattccagtttcttgttctctggtgcacaagatgt 415
Query: 245 ggcctggtgcaaatcccacagagaagaaggcaaacagaatgcccggagcagggctggtcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggcctggtgcaaatcccacagagaagaaggcaaacagaatgcccggagcagggctggtcc 355
Query: 305 acctagcgggacaagacatcctcgctttctaagaacttgtgattcacaactctgtgtgtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acctagcgggacaagacatcctcgctttctaagaacttgtgattcacaactctgtgtgtc 295
Query: 365 caggtttcaccgacacgtgttaagaatatgttctcgaggaaatcaggtaaggacagagag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 caggtttcaccgacacgtgttaagaatatgttctcgaggaaatcaggtaaggacagagag 235
Query: 425 gaacagagctgaaagaattgaagcccagag 454
||||||||||||||||||||||||||||||
Sbjct: 234 gaacagagctgaaagaattgaagcccagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_g16.g1 MSMg01no357_g16.g1 CHROMAT_FILE:
MSMg01no357_g16.g1 PHD_FILE: MSMg01no357_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:24 2005
(444 letters)
>mm_chr2_147744072_147744915
Length = 844
Score = 427 bits (221), Expect = e-124
Identities = 241/255 (94%), Gaps = 13/255 (5%)
Strand = Plus / Plus
Query: 1 taatcaaaggtggcaagagatgaagtcagacaaagcacattcacatactcgatcatacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 taatcaaaggtggcaagagatgaagtcagacaaagcacattcacatactcgatcatacac 258
Query: 61 acacacacacacacacacacacacacacacac--ttttaaagaacagacaaaaacagtga 118
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 259 acacacacacacacacacacacacacacacacacttttaaagaacagacaaaaacagtga 318
Query: 119 aaagaacatattggtcatgacactttatagatttaaataacataagcaatcatggagaac 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 319 aaagaacatattggtcatgacactttatagatttaaataacataagcaatcatgaagaac 378
Query: 179 aaatacatttataatg-----------ttagggacttttacttattttccttgaaattta 227
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 379 aaatacatttataatgctaaaaatatgttagggacttttacttattttccttgaaattta 438
Query: 228 acattaaatatgctg 242
|||||||||||||||
Sbjct: 439 acattaaatatgctg 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
