Query= MSMg01no359_m14.b1 MSMg01no359_m14.b1 CHROMAT_FILE:
MSMg01no359_m14.b1 PHD_FILE: MSMg01no359_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:21 2005
(447 letters)
>mm_chr2_79301188_79302029
Length = 842
Score = 787 bits (407), Expect = 0.0
Identities = 432/443 (97%), Gaps = 5/443 (1%)
Strand = Plus / Minus
Query: 5 gaattcttgaatcgaaaataattatgcctttcaatgacaatgatgtctgaataacaccgg 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 642 gaattcttgaaacgaaaataattatgcctttcaatgacaatgatgtctgaataacactgg 583
Query: 65 atgaagagtttgtttgctaatcgtatttagaaataaaaaccagtaagtatatgttctgac 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 582 atgaagagtttgtttgctaatcgtatttagaaataaaaa-----aagtatatgttctgac 528
Query: 125 taaagtgtaatctgcttctgaaaagaattgggcttcttttcttttatttccacgtttctt 184
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 527 taaagtgtaatctgcttctgaaaagaatttggcttcttttcttttatttccgcgtttctt 468
Query: 185 tgatcaatcccaatcaaactattttgcagacctaaaacactcgtgtcttggtttaagggt 244
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgatcaatcccaatcaaactatgttgcagacctaaaacactcgtgtcttggtttaagggt 408
Query: 245 gcttgctcttcccagaatcacatttctgatagactgttttccagtgtattataaaatagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gcttgctcttcccagaatcacatttctgatagactgttttccagtgtattataaaatagc 348
Query: 305 cacgtgtaccaatgtggtatttaaagctttgtggtacatcaaatctgaaacatgtaatac 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 347 cacgtgtaccaatgtggtatttaaatctttgtggtacatcaaatctgaaacatgtaatac 288
Query: 365 aattttgcttctgtaggcttatgtcacccataatggaagttatttatggtataaaacagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aattttgcttctgtaggcttatgtcacccataatggaagttatttatggtataaaacagc 228
Query: 425 tggagaattgattggataattgt 447
|||||||||||||||||||||||
Sbjct: 227 tggagaattgattggataattgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 842
Length adjustment: 10
Effective length of query: 437
Effective length of database: 832
Effective search space: 363584
Effective search space used: 363584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_m14.g1 MSMg01no359_m14.g1 CHROMAT_FILE:
MSMg01no359_m14.g1 PHD_FILE: MSMg01no359_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:21 2005
(437 letters)
>mm_chr2_79124214_79125050
Length = 837
Score = 822 bits (425), Expect = 0.0
Identities = 434/437 (99%)
Strand = Plus / Plus
Query: 1 cttccttgcttcagttagaactattctcccttcttctcattagtgcaaaagtaatttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccttgcttcagttagaactattctcccttcttctcattagtgcaaaagtaatttgta 260
Query: 61 cttgtaagtcatgtgcatgcttgtataaagcccgtcttgtatccatggttcctggaggaa 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgtaagtcatgtgcatgcttgtataaagcccgtcttgtatccatggttcctggaggaa 320
Query: 121 gcagggtgttgcttacatatactcctccatggcccctttcactggttcactctgcccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagggtgttgcttacatatactcctccatggcccctttcactggttcactctgcccagt 380
Query: 181 gagtgcattgtctttagcaagagctcaataaatgtttgttaaattgaattattaaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtgcattgtctttagcaagagctcaataaatgtttgttaaattgaattattaaaatga 440
Query: 241 tttattggattttcaaagctggggatcttgggttcgacaatttcccatgtcctctgagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttattggattttcaaagctggggatcttgggttcgacaatttcccatgtcctctgagct 500
Query: 301 ctaatcaaactattctatgtgttgacttaataaatatttattgaattgaactgggatgtg 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaatcacactattctatgtgttgacttaataaatatttattgaattgaactgggatgtg 560
Query: 361 tgtactgaagctctatctgtggtttgatgcattagaaaaatccatatccaattatagcag 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtactgaagctctctctgtggtttgatgcattagaaaaatccatatccaattatagcag 620
Query: 421 taaagcacgtgacaagt 437
|||||||||||||||||
Sbjct: 621 taaagcacgtgacaagt 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
