Query= MSMg01no359_p24.b1 MSMg01no359_p24.b1 CHROMAT_FILE:
MSMg01no359_p24.b1 PHD_FILE: MSMg01no359_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:37 2005
(406 letters)
>mm_chr2_19611719_19612525
Length = 807
Score = 677 bits (350), Expect = 0.0
Identities = 389/402 (96%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 6 gaattctctgattctcgt-ctgtggttatcagtatagtctctggagtagacacccactca 64
|||||||||||||| || |||||||||||| |||||||||||||||||||||||||||
Sbjct: 607 gaattctctgattcaagtaatgtggttatcagcatagtctctggagtagacacccactca 548
Query: 65 atatcctgcttgtgatgtaggaaaccccagtacacattctagtgccctgatgagttagtc 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 547 atatcctgcttgtgatgtaggaaaccccagtacgcattctagtgccctgatgagttagtc 488
Query: 125 tgtcatagtttagagattcttttttacagaaagctctcgttttaaaatgaaaatcagcga 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 487 tgtcatagtttagagattcttttttacaaaaagctctcgttttaaaatgaaaatcagcga 428
Query: 185 gagatacctagatactagtgttctgcatggcttggtgtggaaaacaagggtcagtaaaaa 244
||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||
Sbjct: 427 gagatacctagatactaatgttccacacggctcggtgtggaaaacaagggtcagtaaaaa 368
Query: 245 aggcctttcatcggtgcttcagcgtgccgtgccgaagctgagctcactgctaaccacaga 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 367 aggcctttcatcggtgcttcagcgtgccgtgccgaagctgagctcactgataaccacaga 308
Query: 305 gaagcaattctggttttgttccaactctgctaaggtcgtagagcaatgacctccatgtca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaagcaattctggttttgttccaactctgctaaggtcgtagagcaatgacctccatgtca 248
Query: 365 gcttacttggcaaacatatgaacaccaccagccctcaacagt 406
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gcttacttggcaaacatatgaacaccaccagccctcaacagt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 807
Length adjustment: 9
Effective length of query: 397
Effective length of database: 798
Effective search space: 316806
Effective search space used: 316806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_p24.g1 MSMg01no359_p24.g1 CHROMAT_FILE:
MSMg01no359_p24.g1 PHD_FILE: MSMg01no359_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:37 2005
(329 letters)
>mm_chr2_19434453_19435181
Length = 729
Score = 613 bits (317), Expect = e-180
Identities = 326/329 (99%)
Strand = Plus / Plus
Query: 1 cactctgtggggtgcttatcccagactcattctcatcttcagcttgttcttttattacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactctgtggggtgcttatcccagactcattctcatcttcagcttgttcttttattacac 260
Query: 61 ctactgcttaaggaaggagcttgtgtctcagttgaagctttggagtttgtcttttccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctactgcttaaggaaggagcttgtgtctcagttgaagctttggagtttgtcatttccatt 320
Query: 121 ctttgtttttctgcctgccccctctccaggttccggtcatcctctttctgctctaccacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgtttttctgcctgccccctctccaggttccggtcatcctctttctgctctaccacg 380
Query: 181 ggttctcatcttgtcatctcaacatgtccctatgacatgagccagccatgccacatttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttctcatcttgtcatctcaacatgtccctatgacatgagccagccatgccacatttcc 440
Query: 241 agaagtcctacttcacacctcacactgcacactcacacttggctgccaccttctatgccc 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaagtcctacaacacacctcacactgcacactcacacttggctgccaccttctatgccc 500
Query: 301 tcctgctctctggagaataacagctcagg 329
|||||||||||||||||||||||||||||
Sbjct: 501 tcctgctctctggagaataacagctcagg 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
