NCCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCACACCTCTCAACCCCTTACCCCATAAAATCCCCTAGCTTC
CGAGCCTCATGGCTGACATCCGTTATCTCCTGTGTGGGATGCATGTCGTT
CCAGAGCTCCGTAATTAAACGACCTCATGTAATTACATCAAGATGGTCCT
TCGTGATTTTTTTGGGTGCACGCCAAATCGGGAATTGAGTGGGGGTTTCC
CCACTGGGTTCTATCACCCACTCCTGCTTGCTACCACTAGCTAGGAATAA
TGCCAGATTATGAACCCATCAGGGATTAGTCTCCTTATTAGGCCAGAGTC
TGTGATGGTTACCTTGATTGTCAAATTGACTGGAATTACAATCACCAAGA
TTCTAAATTTGGGGCTAATGTCTGTGAGAATTTCTACACTAGCTGCTGTG
TGAGGGTTCTCTAGAGAAACAGAATTGGTAGAATGAATAAGTATAAATGG
ATCTTTGTATAAGTATATATTATAATACTCATATCCCACACTAGTTTTAA
ATAATTTTATTGATACTGGCCAGGAGTCCTATTTGAGAGATAGTTCCTCA
CTCATACATGACAAATGGAGAAAATTCCTAGTGAGCAATTCAGTTTTATA
CACACACACACATTATACACTCACATTAATTTTCTTATACTCTTTTTCAT
CTTTTCTCAATATGTCTATAATGTATATATAAATTTACTTAGTTTTATTG
TCTTTATTT

CCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGAGATTCCTAACTGTGGAAGAA
GACAATGGGTACAATGGAGAATTGAAAGTGTTTGACTTAAAAATCAGTGA
TACAATAGAAACAGATATATAAAAGTTGGGATCTTAAACAGATGCACTTA
GCACTTAAAACGAGCAGAATGCATAGAAACAAACACTTATCTAGGACTAA
TTGGCTACTCTGGGTCTTTTGTTGCTCCATATCAATTTGAGGATTTTCTA
TTTATGTGAAGAATGAGATGAGGATGTTGATTGTGATTTCAATCAATCAG
TAAATTGTGTTAGTAGGAAGGTCTTTTTTTTAAATGTTAATTCTACGAAG
CTATACGCTTGGGAGGTCTTCAAATTCTAGTACCTTTCTTAATCTCTTTC
TTCACACATTTAAAGTTTTCATTGTAAAGGTTTTTCTACCCATTTTGTTA
TGTATATTCTAAATATTTGTTTTGAGAAACTGGGAAGAGGAGCATGTTCA
TGATCTCTTTCTCAGCATGCTTGTTACTCATATGTGTTAAGACTAGTACA
TTTTTTAAGTCAACTATGTATCTAAATACTTTGCTGGAAATATTGACTTC
TATAATTTTTCTATGTCCACTTTGGGAACACTGAATATAATATATCATAA
CCTTCCCTTGTACAATTCTGACTTACTATTTTTTCTTCTTGTTCCCTCCC
TTTTTCCTCG

Query= MSMg01no361_i03.b1 MSMg01no361_i03.b1 CHROMAT_FILE:
MSMg01no361_i03.b1 PHD_FILE: MSMg01no361_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:34 2005
         (548 letters)



>mm_chr2_80335231_80336178
          Length = 948

 Score = 1013 bits (524), Expect = 0.0
 Identities = 536/540 (99%)
 Strand = Plus / Plus

                                                                       
Query: 9   tccacacctctcaaccccttaccccataaaatcccctagcttccgagcctcatggctgac 68
           |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tccacacccctaaaccccttaccccataaaatcccctagcttccgagcctcatggctgac 268

                                                                       
Query: 69  atccgttatctcctgtgtgggatgcatgtcgttccagagctccgtaattaaacgacctca 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atccgttatctcctgtgtgggatgcatgtcgttccagagctccgtaattaaacgacctca 328

                                                                       
Query: 129 tgtaattacatcaagatggtccttcgtgatttttttgggtgcacgccaaatcgggaattg 188
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 329 tgtaattacatcaagatggtcctttgtgatttttttgggtgcacgccaaatcgggaattg 388

                                                                       
Query: 189 agtgggggtttccccactgggttctatcacccactcctgcttgctaccactagctaggaa 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agtgggggtttccccactgggttctatcacccactcctgcttgctaccactagctaggaa 448

                                                                       
Query: 249 taatgccagattatgaacccatcagggattagtctccttattaggccagagtctgtgatg 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taatgccagattatgaacccatcagggattagtctccttattaggccagagtctgtgatg 508

                                                                       
Query: 309 gttaccttgattgtcaaattgactggaattacaatcaccaagattctaaatttggggcta 368
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 509 gttaccttgattgtcaaattgactggaattacaatcaccaggattctaaatttggggcta 568

                                                                       
Query: 369 atgtctgtgagaatttctacactagctgctgtgtgagggttctctagagaaacagaattg 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atgtctgtgagaatttctacactagctgctgtgtgagggttctctagagaaacagaattg 628

                                                                       
Query: 429 gtagaatgaataagtataaatggatctttgtataagtatatattataatactcatatccc 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtagaatgaataagtataaatggatctttgtataagtatatattataatactcatatccc 688

                                                                       
Query: 489 acactagttttaaataattttattgatactggccaggagtcctatttgagagatagttcc 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 acactagttttaaataattttattgatactggccaggagtcctatttgagagatagttcc 748


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)