NTTTCATCTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCAAAAAGGGTGACACATTGTTATGTAAACATTGCTTAC
TAAAGACTTAATGGATGTGAAAAAGAATGAATGTGCTTAGTACATTGAAT
TACACACATTCCTATAGATATTCTTAAAATCTAAGAAAATCTATTTGGTT
GAATCTTCCACTTCATATCCTTTCCTTTGGTTTAATTTGAATAGATTTAT
CAGAAGTGGAGCCTCTAGTTTCAAATCAAGAGACATCATTAATGGAATGA
AATTTTGCACACCAATCTAAAAACACAGTAATAGTCATTAATTTTTCAAC
TTGTCAGTAGCAACTGTGTTAATGTAATAGTGCCTAAGATATCTAATGTT
TGTCTTAACGCTATCACAACAGTTTTCTATGAAAACCTTTATCTTTAGTA
ACTTCATGAATGGACTCACAGTATCTGTTGTTTCAGGATTCTTGTTGCCA
TTGTTTGGCTCCTTCTGGTGTAAGTCTTTAGAAATGCAGTGCCTCATGAC
TGTGTGTAAAAGTTTTTAATCTCATGTGAAATCTCTTCCTTGAGGGAGAC
TGTGGAGGAGGAGGAGGAGGAGGAGGAGANAAATANGAGTGNNTNNNTTN
NNTTTTTNTTNNNTTTTTNNTTTTTTNTTNNTTTTNNTTNNNTTNNNNTT
TTTTTTTTTNTTTTTNNTTTT

NNNAACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTAATGAGTGGTTGTGGA
GAGGCCTCAACCCGTTGTGAGTGGTGACATCTCTGGGCTGGTGGCCCTGG
GTTCTATAAAATGGCAGGCTGTGGTGATTTGAATACATTTAGCTCCCATA
AATTCCTTTGTTTGAATGCTTGGCCATAGGGAGTGGCACAATTAGGAGGT
GTGGCTTTTTTGGAGGAGGTATGACCTTGTTACAGGAAGCGTGTCACTAC
ATAAGCGGGCTTTGAGGTCTTCTATGCTTAGGCTCTCTCTCCAGTCTGGA
ATCTAGTCTCCACCTGGCTGCCTTCACATCAGGATGTAGAACTCTCAGCT
CCTTCAACATGCTGCAATGCTTCCCTCCATGATGATAATGGACTGGACCT
CTGAAACTGTAAGCCACCCCCAATTAAATATTCGCCTTTATAAGAGTCGC
CTTGGTCATGGTGTCTCTTCCCAGCAATGGAAACCTAAACTGAGACACAG
ACTGAACTCGCCATGAGGAGCAGGCCTCTGCATCAGCTCCTGTCTCCAGG
TTCCTGTCCTGTTTGAGTTCCTATCCTGACTTTCTTCAATAATGAACAGT
GCTGTGGAAGTGTAAGCCACAGACACCCTTTCATGCCCAAGTTGCTTTGG
TCATTGTACCTCATGACAGCAGTAGTCATCCTAACT

Query= MSMg01no361_j12.b1 MSMg01no361_j12.b1 CHROMAT_FILE:
MSMg01no361_j12.b1 PHD_FILE: MSMg01no361_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:41 2005
         (572 letters)



>mm_chr2_83863735_83864706
          Length = 972

 Score = 1100 bits (569), Expect = 0.0
 Identities = 569/569 (100%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcaaaaagggtgacacattgttatgtaaacattgcttactaaagacttaatggat 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggaattcaaaaagggtgacacattgttatgtaaacattgcttactaaagacttaatggat 691

                                                                       
Query: 64  gtgaaaaagaatgaatgtgcttagtacattgaattacacacattcctatagatattctta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gtgaaaaagaatgaatgtgcttagtacattgaattacacacattcctatagatattctta 631

                                                                       
Query: 124 aaatctaagaaaatctatttggttgaatcttccacttcatatcctttcctttggtttaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aaatctaagaaaatctatttggttgaatcttccacttcatatcctttcctttggtttaat 571

                                                                       
Query: 184 ttgaatagatttatcagaagtggagcctctagtttcaaatcaagagacatcattaatgga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttgaatagatttatcagaagtggagcctctagtttcaaatcaagagacatcattaatgga 511

                                                                       
Query: 244 atgaaattttgcacaccaatctaaaaacacagtaatagtcattaatttttcaacttgtca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atgaaattttgcacaccaatctaaaaacacagtaatagtcattaatttttcaacttgtca 451

                                                                       
Query: 304 gtagcaactgtgttaatgtaatagtgcctaagatatctaatgtttgtcttaacgctatca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtagcaactgtgttaatgtaatagtgcctaagatatctaatgtttgtcttaacgctatca 391

                                                                       
Query: 364 caacagttttctatgaaaacctttatctttagtaacttcatgaatggactcacagtatct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 caacagttttctatgaaaacctttatctttagtaacttcatgaatggactcacagtatct 331

                                                                       
Query: 424 gttgtttcaggattcttgttgccattgtttggctccttctggtgtaagtctttagaaatg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gttgtttcaggattcttgttgccattgtttggctccttctggtgtaagtctttagaaatg 271

                                                                       
Query: 484 cagtgcctcatgactgtgtgtaaaagtttttaatctcatgtgaaatctcttccttgaggg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cagtgcctcatgactgtgtgtaaaagtttttaatctcatgtgaaatctcttccttgaggg 211

                                        
Query: 544 agactgtggaggaggaggaggaggaggag 572
           |||||||||||||||||||||||||||||
Sbjct: 210 agactgtggaggaggaggaggaggaggag 182


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)