Query= MSMg01no362_d18.b1 MSMg01no362_d18.b1 CHROMAT_FILE:
MSMg01no362_d18.b1 PHD_FILE: MSMg01no362_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:31 2005
(467 letters)
>mm_chr2_132534379_132535247
Length = 869
Score = 849 bits (439), Expect = 0.0
Identities = 458/465 (98%), Gaps = 2/465 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttttgttaggagctaatcttggtgggaattttgttttagaacatcaaattaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagttttgttaggagctaatcttggtgggaattttgttttagaacatcaaattaa 264
Query: 65 c--cccacacaggaacttcagggtggctttttgttttgtttttttgagttgctgtggcac 122
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caccccacacaggaacttcagggtggctttttgttttgtttttttgagttgctgtggcac 324
Query: 123 actcggtggcacttgcagaggtggaggtgcaagaggaacgtctcctaggaggaggtgaga 182
|||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 actcggtggcgctggcagaggtggaggtgcaagaggaacgtctcctaggaggaggcgaga 384
Query: 183 agtgctgggccaacttctctttccaaaattgtatctgtaagtgatttataagtgatggca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgctgggccaacttctctttccaaaattgtatctgtaagtgatttataagtgatggca 444
Query: 243 gcttttgaaagttactgaatcgtgtagctaaatagaaaggatctggttgtacatgtttgt 302
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 gcttttgaaagttactgaatcgtgtggctaaatagaaaggatctggttgtacatgtttgt 504
Query: 303 acaaaagtaggaaacccacgcaggtccgtgaaatgaacatgagccaaggtttagagcagc 362
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acgaaagtaggaaacccacgcaggtccgtgaaatgaacatgagccaaggtttagagcagc 564
Query: 363 agttctcaacctgtggttctccagcccttcgggggccacagatcagatgccctgcagatc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agttctcaacctgtggttctccagcccttcgggggccacagatcagatgccctgcagatc 624
Query: 423 agatgtctacattacagttcacagcagtagcaaaattacagttag 467
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agatgtctacattacagttcacagcagtagcaaaattacagttag 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 869
Length adjustment: 10
Effective length of query: 457
Effective length of database: 859
Effective search space: 392563
Effective search space used: 392563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_d18.g1 MSMg01no362_d18.g1 CHROMAT_FILE:
MSMg01no362_d18.g1 PHD_FILE: MSMg01no362_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:31 2005
(475 letters)
>mm_chr2_132603952_132604826
Length = 875
Score = 888 bits (459), Expect = 0.0
Identities = 471/475 (99%)
Strand = Plus / Minus
Query: 1 caggctagcctaggccaaaaagaaaacagcaagagaggggggaaggtacagtctacgaga 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 675 caggctagcctaggccaaaatgaaaacagcaagagaggggggaaggtacagtctacgaga 616
Query: 61 gaggttctccctctattgttgacataacacagggttaatgctactctttaaatataccag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 615 gaggttctccctctattgttgacataacacagggttaatgccactctttaaatataccag 556
Query: 121 gtattggtagttatttaaagctgctctctccttgaagtatttatacactggttttccaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtattggtagttatttaaagctgctctctccttgaagtatttatacactggttttccaat 496
Query: 181 acttcccctctcttctttttccctagaaaaccatgggattaaacaatgttaaaatcatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acttcccctctcttctttttccctagaaaaccatgggattaaacaatgttaaaatcatct 436
Query: 241 tttggcttctcaggttggccttgggctaagttggctgctcattaagacaaccttggtgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tttggcttctcaggttggccttgggctaagttggctgctcattaagacaaccttggtgac 376
Query: 301 cttggtgaaggaaagctgttttctttcatggccaagagccagtctctacattaagtttta 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cttggtgaaggaaagctcttttctttcatggccaagagccagtctctacattaagtttta 316
Query: 361 gatctctctgtgcttgggtgaaggatgctgagagcggactgccaggatctacattgttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gatctctctgtgcttgggtgaaggatgctgagagcggactgccaggatctacattgttgt 256
Query: 421 catggaagaaaaaaagggcgaacactgtgatggtttttttgtatatgcttggccc 475
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 catagaagaaaaaaagggcgaacactgtgatggtttttttgtatatgcttggccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
