NNNNTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGTCCTGAAGTTGAACTCTGTGCATCAAATGGAAATATTT
CCTTTTCCTTTTCTTTCTTCTATTGAAAATAATTGTTTTTCACATAATAT
AGTCTGATCACAGTTTCCCCTTCCCCCAACTCCTCCTAGATTTTTTTCCC
AACCTCCCTCACATCAGAATATATACTCTTTATGTCTCTCTTTAGGGAAC
AAACAGGCATTTAAAGAATAATAATAAAGTACAATAAAATAATATTAAAC
AAAACCAAACAAACAGAAGAAAAAGATCCAAAGAAAAAATACAAGATACA
AGTGTAGACAAAGACACACATATGTTCATATGCACAGGAATCCTCTAAAA
ACACAAAAACCAACAGCCATAATATATATGCACAAAGGACCTATAGGTTT
AGAANAAAAATGCCCTGTCTAACCTCATGAGACACAGATGGCATTCCCAC
CATGACATTAAGTGGATTGTCCACAGCATGCTATAAATGCCATCTCTTGC
AAATTTATATACGTAAATATGCTTCATTAACACTCTCAAGTCTTATCAGT
ATAAGGAAATTACTAAGCCGGCTTTTTTAGCAAATTATTGAAACTTCCAT
CCCTGGTTTGGATGGGTGGCTTCCCCCTTATGAAAACTTTTCTGCACAAA
ATGGGGGCATTTTTTTTTTTTATTCTCCCCTCCCAACATTAAAAATAAAT
AATTCTACCCCN

NNNNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCTGACATTGAAGCCTGAGA
AGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTATATGCCATAACTCTT
TTTAAACTGTATTTGCTGTAGCAGGTGATGAAGGCACCAGGAAGCTGGAC
CTATACAGTAACCAAGGGTGATGGTGACAGATCGGTTTGATCATTTTTAT
TTTTTTAGAATGGCTTCCTCTCTAGCCCCTATGAAAAGATGTAGACAGAT
GAACTATTGAGTTTGGGATGTTAAAATATGTTCCCAGTTCTCTGTTCATA
ATTTTTCAGACACCAATTGGTAGGAAAACTAGACTTACTACTCTAATGAG
TATAGAGTGTGTCTTGTATTGAGATGTCAGTCCCAAACAGTGCAGTCGTT
TTTGCCATATGGCCTAGGAGGTAAGCATCCTCCCTTATCCTCATCAAAAA
TAAAGAATTGAACTAGTACTCAAATTCTCTGAAAGGATTATTATTCATTG
TATCCCTTTATCCATATTTATCATTAAAATTATTCCCTGAAATAAGGTTT
TTGTACAGCTGGGAAAATTAAAAAATCCCTTTCCTACCTTGCCCAACTTT
TCCTGTGGGAGCGCCCCATCCTTTTCACCCTCTTCTCCTTTTTCTCCATT
GGATAACCACCCTGCTTTTGCTTTTTCCCCCTAACCCACCACCATCCCCT
TTTCTCCCACTTTCCTCCCTTTT

Query= MSMg01no362_f20.g1 MSMg01no362_f20.g1 CHROMAT_FILE:
MSMg01no362_f20.g1 PHD_FILE: MSMg01no362_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:42 2005
         (411 letters)



>mm_chr2_14706466_14707276
          Length = 811

 Score =  644 bits (333), Expect = 0.0
 Identities = 391/419 (93%), Gaps = 16/419 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctgacattgaagcctgagaagtttgtttgtttgtttgtttgtttgtttgttttatatg 60
           |||||||||||||||||| |||        ||||||||||||||||||||||||||||||
Sbjct: 718 ttctgacattgaagcctgggaa--------gtttgtttgtttgtttgtttgttttatatg 667

                                                                       
Query: 61  ccataactctttttaaactgtatttgctgtagcaggtgatgaaggc---a-----ccagg 112
           |||||||| |||||||||||||||||||||||| ||||||||||||   |     |||||
Sbjct: 666 ccataactttttttaaactgtatttgctgtagctggtgatgaaggctttatgcctccagg 607

                                                                       
Query: 113 aagctggacctatacagtaaccaagggtgatggtgacagatcggtttgatcatttttatt 172
            |||||| |||| |||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 606 gagctggtcctagacagtaaccaagggcgatggtgacagataggtttgatcatttttatt 547

                                                                       
Query: 173 tttttagaatggcttcctctctagcccctatgaaaagatgtagacagatgaactattgag 232
            ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 546 attttagaatggcttcctctctagcctctatgaaaagatgtagacagatgaactattgag 487

                                                                       
Query: 233 tttgggatgttaaaatatgttcccagttctctgttcataatttttcagacaccaattggt 292
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tttgggttgttaaaatatgttcccagttctctgttcataatttttcagacaccaattggt 427

                                                                       
Query: 293 aggaaaactagacttactactctaatgagtatagagtgtgtcttgtattgagatgtcagt 352
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 426 aggaaaactagacttactactctaatgagtctagagtgtgtcttgtattgagatgtcagt 367

                                                                      
Query: 353 cccaaacagtgcagtcgtttttgccatatggcctaggaggtaagcatcctcccttatcc 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cccaaacagtgcagtcgtttttgccatatggcctaggaggtaagcatcctcccttatcc 308


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space:   322404
Effective search space used:   322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)