TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAATACTTACATTTAACCATACAAGTTAAATTGCCTCAATGCTGACTT
TGTTTTCTGTTGTAACGTTATTCAGTTGTTTAGGCATTTATCATTTCTAC
TGCTTTGCAGATTTTTGTGAGCCAGTCCTTTTTCATTTTCTTGTCATCTG
AGACATCTAGGAGATCTAAAAATACCAGCTAAAACTTTAAAAATAACTTT
TCTAATGAACTATCATTTTTCAAACTTCACTTTCTTCTTCATGAAGAGTT
TTAGAGATGTTTTTCCATTACATATTATAAACAAGTTTACATCTCTTTCT
TCTGTTATTATTGGACAAAAGTGTGTAAGAAAACTGGAGTGCAAAATACA
AAATATAGAGATTGGTAGTGGACATTTTCAATATATCATTTAGACACTCA
ACTTATAAAATGATAACTAAATAATTTACTTAAATTTTATGTTTTTATAT
AATAAGTTACTGATTTAAGTATTAAAAGTATACCAATTAGATCTGAAGTC
CCAAACAATGTAACTGAATAATGGAAGGCCTGGGTTAAATTCNGAANNAT
CATATTAATCTTTCTTTGGGCTCACGCTTTATTGCTATGGAAAATTTGAT
GCTAAAATGGGCATACTTCCACCATTACCAGGTTGAAAAAAGGAAAGACA
AAGCCTTCCTAATTTCCCCAAAGAACCCTTTCAATGGCCAA

NACGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAATACTTTTATCA
CGAATGGGTGTTGGATTTTGTCAAATGCTTTCCCCGCATCTAACGAGATG
ATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTAAATTGAT
GGGTTTCCATATATTGAACCATCCCTGCATCCCTGAAATAAAACCTACTT
GGTCAGGATGGATGATTGTTTTAATGTGTTCTTGGATTCGGTTAGCGAGA
ATTTAATTGAGTATTTTTGTATTGATATTCATAAGGGAAATTGGTCTGAA
AGTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCATAGTAATGG
TGGCTTCATAGAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGG
AATAGTTTGTGCAGAACTGAAATTAGATCTTCTTTGAAGGTCTGATAGAA
CTCTGCACTGACAAGTGCTTTTCTGGACAAGCCATCCCTCAGGACTTCTG
ACTCTTTCTAACTCCCTCTTTAGTGACCACCCCACTGTGTTTTAGTTTTT
AAGTGTGTTCACTTAATCCTAAATTTCCATTACATTTTTTGCTTATTTAT
ACTCTTAATATAAATCATCAGTTTGGAAATGACCAAATGGAATCTATTTT
TTCTTAACACTTTGTTCTATTCTGAAATATTCCCTCCATATGGAAACCCT
CACCTACCG

Query= MSMg01no363_a17.b1 MSMg01no363_a17.b1 CHROMAT_FILE:
MSMg01no363_a17.b1 PHD_FILE: MSMg01no363_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:38 2005
         (527 letters)



>mm_chr2_114340707_114341635
          Length = 929

 Score =  977 bits (505), Expect = 0.0
 Identities = 521/527 (98%), Gaps = 4/527 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattc-aatacttacatttaaccatacaagttaaattgcctcaatgctgactttgtttt 63
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gaattcaaatacttacatttaaccatacaagttaaattgcctcaatgctgactttgtttt 552

                                                                       
Query: 64  ctgttgtaacgttattcagttgtttaggcatttatcatttctactgctttgcagattttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctgttgtaacgttattcagttgtttaggcatttatcatttctactgctttgcagattttt 492

                                                                       
Query: 124 gtgagccagtcctttttcattttcttgtcatctgagacatctaggagatctaaaaatacc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtgagccagtcctttttcattttcttgtcatctgagacatctaggagatctaaaaatacc 432

                                                                       
Query: 184 agctaaaactttaaaaataacttttctaatgaactatcatttttcaaacttcactttctt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agctaaaactttaaaaataacttttctaatgaactatcatttttcaaacttcactttctt 372

                                                                       
Query: 244 cttcatgaagagttttagagatg-tttttccattacatattataaacaagtttacatctc 302
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 371 cttcatgaagagttttagagatgttttttccattacatattataaacgagtttacatctc 312

                                                                       
Query: 303 tttcttctgttattattggacaaaagtgtgtaagaaaactggagtgcaaaatacaaaata 362
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tttcttatgttattattggacaaaagtgtgtaagaaaactggagtgcaaaatacaaaata 252

                                                                       
Query: 363 tagagattggtagtggacattttcaatatatcatttagacactcaacttataaaatgata 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tagagattggtagtggacattttcaatatatcatttagacactcaacttataaaatgata 192

                                                                       
Query: 423 ac--taaataatttacttaaattttatgtttttatataataagttactgatttaagtatt 480
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 actttaaataatttacttaaattttatgtttttatataataagttactgatttaagtatt 132

                                                          
Query: 481 aaaagtataccaattagatctgaagtcccaaacaatgtaactgaata 527
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aaaagtataccaattagatctgaagtcccaaacaatgtaactgaata 85


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 929
Length adjustment: 10
Effective length of query: 517
Effective length of database: 919
Effective search space:   475123
Effective search space used:   475123
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)