Query= MSMg01no363_b14.b1 MSMg01no363_b14.b1 CHROMAT_FILE:
MSMg01no363_b14.b1 PHD_FILE: MSMg01no363_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:42 2005
(452 letters)
>mm_chr2_120205133_120205984
Length = 852
Score = 835 bits (432), Expect = 0.0
Identities = 444/452 (98%), Gaps = 8/452 (1%)
Strand = Plus / Minus
Query: 5 gaattctgagctaa----ttccgcccaatcagtgcaaggagcaggcacttttgaggacag 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gaattctgagctaaaaag----gcccaatcagtgcaaggagcaggcacttttgaggacag 597
Query: 61 ttatttctgtagtctgcctctagtctacatcattctagatctagactagatcattctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttatttctgtagtctgcctctagtctacatcattctagatctagactagatcattctttc 537
Query: 121 ttatttattagtattacatgctagagatacagttatttttcgaagagaaggtagagactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttatttattagtattacatgctagagatacagttatttttcgaagagaaggtagagactg 477
Query: 181 tttgaggtttttatatttattgtatgctgattttaaatctgaataatttgttcttggctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tttgaggtttttatatttattgtatgctgattttaaatctgaataatttgttcttggctc 417
Query: 241 taattctgctttttatttcattcccaattggataacagtttttcatggtgatgtgtattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 taattctgctttttatttcattcccaattggataacagtttttcatggtgatgtgtattg 357
Query: 301 tgtacgtactatttggtgttctctggctggcatggtctgcttgctactggagagatctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tgtacgtactatttggtgttctctggctggcatggtctgcttgctactggagagatctcc 297
Query: 361 tgagaattcaattttggattggtgctgtcatctttcttggaatgtttgagaaagctgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgagaattcaattttggattggtgctgtcatctttcttggaatgtttgagaaagctgtgt 237
Query: 421 tttatgcagaatttcagaatatccgatacaaa 452
||||||||||||||||||||||||||||||||
Sbjct: 236 tttatgcagaatttcagaatatccgatacaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_b14.g1 MSMg01no363_b14.g1 CHROMAT_FILE:
MSMg01no363_b14.g1 PHD_FILE: MSMg01no363_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:42 2005
(470 letters)
>mm_chr2_120015539_120016408
Length = 870
Score = 861 bits (445), Expect = 0.0
Identities = 463/477 (97%), Gaps = 14/477 (2%)
Strand = Plus / Plus
Query: 1 tgttctctgacccctagtaaggtctcctgtgtggtcctgtagcagttcttcaagtgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttctctgacccctagtaaggtctcctgtgtggtcctgtagcagttcttcaagtgacaa 260
Query: 61 gtggcctgtcctcaatggcctaggtggcatggacgagtttataaggttcccagcctctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggcctgtcctcaatggcctaggtggcatggacgagtttataaggttcccagcctctga 320
Query: 121 tcctgaaaggtttgactcaaggaaagtgttacctcctagatttctatctagtggacataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgaaaggtttgactcaaggaaagtgttacctcctagatttctatctagtggacataa 380
Query: 181 acgtggctttgggcatctacaactatgtaagattttgtaatttctagaaatttggaccat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgtggctttgggcatctacaactatgtaagattttgtaatttctagaaatttggacca- 439
Query: 241 tttttt-------ctgacaactacaaaacaaaaagaaagctcaaaatactgatttcaaga 293
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ------gaacaacctgacaactacaaaacaaaaagaaagctcaaaatactgatttcaaga 493
Query: 294 tggtacactacattcacatggaaatagtcctcccctacaaaactcatacacatgataaaa 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tggtacactacattcacatggaaatagtcctcccctacaaaactcatacacatgataaaa 553
Query: 354 ggggtgacattgtattttagcttattaacactggttttcactgtgtagcccaggtccact 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggggtgacattgtattttagcttattaacactggttttcactgtgtagcccaggtccact 613
Query: 414 tcaaatttgcaatcctcctatctcagtctcctgatgacaggtgtgagccaccacaac 470
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tcaaatttgcaatcctcctatctcagtctcctgatgacaggtgtgagccaccacaac 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
