Query= MSMg01no363_i16.b1 MSMg01no363_i16.b1 CHROMAT_FILE:
MSMg01no363_i16.b1 PHD_FILE: MSMg01no363_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:17 2005
(528 letters)
>mm_chr2_125940680_125941608
Length = 929
Score = 994 bits (514), Expect = 0.0
Identities = 523/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctccac-gttacatatacgtcagtggcaaaagtcactagtgtgtctgtgtacg 62
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctccacagcaacatatacgtcagtggcaaaagtcactagtgtgtctgtgtacg 263
Query: 63 aggctgcggaggtctgtgttggtgaactaagggaacatctaggagagctgctgggaatgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggctgcggaggtctgtgttggtgaactaagggaacatctaggagagctgctgggaatgt 323
Query: 123 atggctgctactgaggtccttggcagcaaatactgctctagcccattgcaaatcaggtca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atggctgctactgaggtccttggcagcaaatactgctctagcccattgcaaatcaggtca 383
Query: 183 ctgtggaccacagtactacctgccacataatgttctgaaggcttctcattggttcttagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgtggaccacagtactacctgccacataatgttctgaaggcttctcattggttcttagt 443
Query: 243 actctatgtgttttacacatgctgacttctcaggctactgcttcccctttcctcttcctc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actctatgtgttttacacatgctgacttctcaggctactgcttcccctttcctcttcctc 503
Query: 303 ctcctccttcctgccctcttcttttctctactgttttactgcaggttctaatgtgactct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcctccttcctgccctcttcttttctctactgttttactgcaggttctaatgtgactct 563
Query: 363 tgaacttttttgtttatgactacataactgagctgttttgtgttgttagaggatagcaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgaacttttttgtttatgactacataactgagctgttttgtgttgttagaggatagcaat 623
Query: 423 atttccttccctacaattttgctgatatttctcccctgtctcctcacacacataaaaatc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atttccttccctacaattttgctgatatttctcccctgtctcctcacacacataaaaatc 683
Query: 483 agttttaaggaaatcctgttttctataataattccaccacttgaaa 528
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agttttaaggaaatcctgttttctataataattccaccacttgaaa 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 929
Length adjustment: 10
Effective length of query: 518
Effective length of database: 919
Effective search space: 476042
Effective search space used: 476042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_i16.g1 MSMg01no363_i16.g1 CHROMAT_FILE:
MSMg01no363_i16.g1 PHD_FILE: MSMg01no363_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:17 2005
(242 letters)
>mm_chr2_126078073_126078713
Length = 641
Score = 398 bits (206), Expect = e-115
Identities = 233/242 (96%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 1 attaagaaaataaccacagttatatagaaatgtggtcaaaacagacaaatcaaggcttga 60
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 441 attaagaaaataaccacagttatatagaaatgtggttgaaacagaaaaatcaaggcttga 382
Query: 61 gagtggagttcggtgcagaccttgtatggatgaggctcagagtttgatcctaagtctaga 120
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtcgagttcggtgtagaccttgtatggatgaggctcagagtttgatcctaagtctaga 322
Query: 121 cagggaatgatgacaagaagcttagggtttgggatgttgcttttcagcatcctgagactc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 cagggaatgatgacaagaagcttagggtttgggatgttgcttttcagcatcctgggactc 262
Query: 181 tgaattcattacttgcatcaccaagatcttaagtactttttttattgttgagataagaca 240
||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||
Sbjct: 261 tgaattcattacttgcatcaccaggattttaagtactttttt-attgttgagataagaca 203
Query: 241 cc 242
||
Sbjct: 202 cc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 641
Length adjustment: 9
Effective length of query: 233
Effective length of database: 632
Effective search space: 147256
Effective search space used: 147256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
