Query= MSMg01no363_j01.b1 MSMg01no363_j01.b1 CHROMAT_FILE:
MSMg01no363_j01.b1 PHD_FILE: MSMg01no363_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:19 2005
(584 letters)
>mm_chr2_129189012_129189995
Length = 984
Score = 1064 bits (550), Expect = 0.0
Identities = 577/588 (98%), Gaps = 4/588 (0%)
Strand = Plus / Plus
Query: 1 acaattttctttttctgtaatttgttttgtgtcttgacttagcttctggttattcttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaattttctttttctgtaatttgttttgtgtcttgacttagcttctggttattcttgat 260
Query: 61 tttatttatgcatcattcactctcatatccccatgactttgttcctttgggaccttagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatttatgcatcattcactctcatatccccatgactttgttcctttgggaccttagac 320
Query: 121 ctgatgtacctttttcccctccatttttcaaacttgctcttgttcctttagatctggctc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ctgatgtacctttttcccctccatttttcgaacttgctcttgttcctttagatctggctc 380
Query: 181 aaatgtcaacctccctggtttgtcatctctcctaccagaccctgtaggtctttcctggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgtcaacctccctggtttgtcatctctcctaccagaccctgtaggtctttcctggct 440
Query: 241 aatctttttatacttcatcttgtctctatttggtcatgttgccttaatttctatatctat 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actctttttatacttcatcttgtctctatttggtcatgttgccttaatttctatatctat 500
Query: 301 ttgtctgtctgtctgtctgtctatctatctatctatctatctatccatccatccatccat 360
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 ctgtctgtctgtctatctatctatctatctatctatctatctatccatccatccatctat 560
Query: 361 ttttctatccctctatctcctaagcttattcttaactctcagcgtactcatctctgtact 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 ttttctatccctctatctcctaagcttattcttaactctcagagtactcatctctgtact 620
Query: 421 aggcactcagcgtttgttgaacaggtgtctgtgaactaaatgatttaggatcaaacctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggcactcagcgtttgttgaacaggtgtctgtgaactaaatgatttaggatcaaacctta 680
Query: 481 ctccctttaaagtttcagctgatcttatttctttgatgaatcatatgtaatgaaaatccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctccctttaaagtttcagctgatcttatttctttgatgaatcatatgtaatgaaaatccc 740
Query: 541 tttgtgtatatatgtgctctgtgtgtgtgtgtgtg----cattcacat 584
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 741 tttgtgtatatatgtgctctgtgtgtgtgtgtgtgtgtgcattcacat 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_j01.g1 MSMg01no363_j01.g1 CHROMAT_FILE:
MSMg01no363_j01.g1 PHD_FILE: MSMg01no363_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:19 2005
(438 letters)
>mm_chr2_129398213_129399050
Length = 838
Score = 839 bits (434), Expect = 0.0
Identities = 437/438 (99%)
Strand = Plus / Minus
Query: 1 tctatcctgagactcacaggagttcactcctaagtgtctttggcacagatgctgccacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tctatcctgagactcacaggagttcactcctaagtgtctttggcacagatgctgccacaa 579
Query: 61 ctcacggagcgttctcatgaatgctggacatctgcccggtggccttcccatgtggcatgg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cgcacggagcgttctcatgaatgctggacatctgcccggtggccttcccatgtggcatgg 519
Query: 121 gtgccggggccatacctatggatactctgcacccactccaaggacacatcttgtatgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gtgccggggccatacctatggatactctgcacccactccaaggacacatcttgtatgggc 459
Query: 181 tcatttttccgtgtcacaactacgtgaggcagatggacagcaaaacttgggtggtaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tcatttttccgtgtcacaactacgtgaggcagatggacagcaaaacttgggtggtaatga 399
Query: 241 gtgccccaactcctctcagtttctgttctcagctgtgagtggacttgggttgggggtggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gtgccccaactcctctcagtttctgttctcagctgtgagtggacttgggttgggggtggg 339
Query: 301 gtagctggttgaaaaacaaccaacgtgatcttagatttttctctttcttcgttttaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtagctggttgaaaaacaaccaacgtgatcttagatttttctctttcttcgttttaagat 279
Query: 361 tgcaacagcacggacggactgaaagtgctgatgcttgttaaccccatgactgtgctgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgcaacagcacggacggactgaaagtgctgatgcttgttaaccccatgactgtgctgtgc 219
Query: 421 tgtattttacatatccag 438
||||||||||||||||||
Sbjct: 218 tgtattttacatatccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
