Query= MSMg01no364_m05.b1 MSMg01no364_m05.b1 CHROMAT_FILE:
MSMg01no364_m05.b1 PHD_FILE: MSMg01no364_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:00 2005
(427 letters)
>mm_chr2_70929249_70930075
Length = 827
Score = 717 bits (371), Expect = 0.0
Identities = 412/429 (96%), Gaps = 10/429 (2%)
Strand = Plus / Plus
Query: 5 gaattccagtaat--ctttcccagaatgttagttaaaaggaacctgcgtgtagggagaaa 62
||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattccagtaatcacttt--cagaatgttagttaaaagcaacctgcgtgtagggagaaa 262
Query: 63 ctgtttcttacagtccctttctgagaaacccagttgctcagaatctccccggtcatctca 122
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 263 ctgtttcttacagtccctttctgagaaacccagctgctcagaatctccccggtcatctca 322
Query: 123 tttttccaagtcgtcctccaaagagaaatataaaacaagaaaagagcagtcagagcaggt 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttcttccaagtcgtcctccaaagagaaatataaaacaagaaaagagcagtcagagcaggt 382
Query: 183 agttcacacctgtaatccagcactcggggagctgcagcaggaggattgctgcaaacttaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agttcacacctgtaatccagcactcggggagctgcagcaggaggattgctgcaaacttaa 442
Query: 243 ggccaacttgtactatgtagcaaagccttgctttaaagaaaacaaaacccttgatctcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggccaacttgtactatgtagcaaagccttgctttaaagaaaacaaaacccttgatctcaa 502
Query: 303 aggcagaggcaggacaatcaagaattctgtgtcagcttggcatgtaatgagttcagagcc 362
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 503 aggcagaggcaggacaatgaagaattccgtgtcagcttggcatgtaatgagttcagagcc 562
Query: 363 ----tggactgcat-gagactctgccttaataaagcataggagaagaacaacaggccatt 417
|||||||||| |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 563 agcctggactgcattgagactctgc-ttaataaagcataggagaagagcaacaggccata 621
Query: 418 cttgattca 426
|||||||||
Sbjct: 622 cttgattca 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_m05.g1 MSMg01no364_m05.g1 CHROMAT_FILE:
MSMg01no364_m05.g1 PHD_FILE: MSMg01no364_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:00 2005
(428 letters)
>mm_chr2_71118998_71119824
Length = 827
Score = 797 bits (412), Expect = 0.0
Identities = 424/428 (99%), Gaps = 1/428 (0%)
Strand = Plus / Minus
Query: 1 cattaaaaaacaacaacagttactgtactttcacaaaacgccagtcaacagatttctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cattaaaaaacaacaacagttactgtactttcacaaaacgccagtcaacagatttctccc 568
Query: 61 ctgccgatatacttaccaccgtcattacagatcagatgtaatggagcagaagccagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctgccgatatacttaccaccgtcattacagatcagatgtaatggagcagaagccagtatt 508
Query: 121 tttctttaactaggagagtatttctttccgttcctttccctggtagaagggaaaatacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tttctttaactaggagagtatttctttccgttcctttccctggtagaagggaaaatacag 448
Query: 181 aaatttcacctctataggggactgtgtttccacagcattgaatttatttatggatccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaatttcacctctataggggactgtgtttccacagcattgaatttatttatggatccata 388
Query: 241 actactgaaatgtgtaaatttacctctgtaactgcaaattagaaattagggatgtctaga 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 387 actactgaaatgtgtaaatttacctctgtaactgcaaattagaaattaggaatgtctaga 328
Query: 301 ttagagctgtaagccacagggtgctccagagcccggctgccagccgagtctgtctttacc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttagagctgtaagccacagggcgctccagagcccggctgccagccgagtctgtctttacc 268
Query: 361 aaatgcctctgctccgctcctcccgcccaccctcactgccatccgttgagattcccttgg 420
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 267 aaatgcctctgct-cgctcctcccgcccaccctccctgccatccgttgagattcccttgg 209
Query: 421 agagcaga 428
||||||||
Sbjct: 208 agagcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space: 342742
Effective search space used: 342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
