GGGCCGCTATACGACTCACTATTTTCAGAGGATCCGCGGAATTCAATGGT
ATTACAGACGAGATTAAGGTCTGGGGAGATGTTCAAGCTGCTAAGACTAC
TGGCTGCTCTTGCAGAGAACCTCAGCTTAGTTATCAGCATCCACATGGGA
TAGCTCATAGCAATCTATAACTCTAGTTCTAAAGAATCTGATGAACTCTT
TAGGCTTCTGTAGGTACCAGGCATGCATATGGTATACATATAAATGTTCA
GGATCATGACATAATATAAAAAGTGAAATAAATATAAAAGACAGACAGAA
ACAGACTAGAGGCTATAAAGAGCTGCCTAATATGGATGCTGGGAAACAAA
CTTGAGTTCTCTAGAAGAACAGCAAGCACTCTTAACAACTAAGCTATAGC
TGTAGCCATTATTTGATTTTTAAATGTTATTTAAGTGCACACACGTCTGA
ATGCTCATATTCATGTGGAAGCCAATGGACAACTTGTACTGTCCTCCTAA
AGAACATTCTCAAGCTCCATTGAGACCTGGCTTCTCAGGAGCATGGAGCT
CACTATGTAAGCTAAGCTAAATTGCCAGCAGTCCCAGGGAGTCTCCGGTC
TCTGCCTTTCCCAGTTTTAGCATGCTCTAGCACACCTGACATTTGTATGC
GAGTTCTGGATCAAACCTTTGTCCTTCATGCTTGTCAATGCTAGTACTTT
ATCTTTTGTGTTCCTGCCTCCGTCCTTCCCTCCTATATCCTTGTGACCAT
CCCATAG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAAGACAGCCAAAGCTACACAGAGA
AACTCTTGTCTCAAAAAAACTAATAAAAAAAAAAAACCTAACACCCAGGC
TTTACCTCTAAAGATCTCAGAAAGAGACAGGTACGAAGAGCCATATAGCA
AGAAGCTGTCATATCTGAAGACATGTGAGACATATCTCAAACCCGTGTCG
TAAGCTCAGCACCTGGCAGATCAGGGAAGATTTGGTTAAGGAGCAGGCAT
TTGCCAGGCAAAGAAAGCTCATGGTCAGAGAGTGCAGAGGTGTGGCAAGG
CATAGCAAGGGAAGGGAGCAGGGCGGGCTGGTTGAAACATCATTTTCAGG
TTGCGATGACTTTATTCCAAAGGCGATGGGGAGCGGTGAGAGGTGGTGTG
TCAGGGTTGATATATGGAGAACAGCACTGAGAAAAGTTCAGTCAAAGCCA
GGAGAGGAATGGGCTGCTGGTGATGAGGAAGTGATCGTTTAGACCAGACA
TGATGGGATTTGAAGTGGTCAAGCCACAGGGTTCTGCCAGGAAGCCTCTA
ACCACACTGAACCACATAGTCCAACCGCAGTGGTTCTCAAAGAGTGTCCC
CCACCCTCCCCTGAACAGGAAATCTGTGATGTCTTTCCCCTAATAAGAAT
TGTTCTGGTTTGAAAGCTTGGATTTAACCGGGTGGGGTTAACACCTCCCC
GCAAATTTTAGGGCCTTTTTTGCTTG

Query= MSMg01no365_o20.g1 MSMg01no365_o20.g1 CHROMAT_FILE:
MSMg01no365_o20.g1 PHD_FILE: MSMg01no365_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:34 2005
         (465 letters)



>mm_chr2_160340575_160341439
          Length = 865

 Score =  729 bits (377), Expect = 0.0
 Identities = 454/499 (90%), Gaps = 34/499 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagacagccaaagctacacagagaaactcttgtctcaaaaaa----------------- 43
           |||||||||||||||||||||||||||||||||||||||||||                 
Sbjct: 167 caagacagccaaagctacacagagaaactcttgtctcaaaaaactaatgataataataat 226

                                                                       
Query: 44  actaataa-aa-a------aaaaaaacctaacacccaggctttacctctaaagatctcag 95
           | |||||| || |      |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 227 aataataataataccccccaaaaaaacctaatacccaggctttacctctaaagatctcag 286

                                                                       
Query: 96  aaagagacaggtacgaagagccatatagcaagaagctgtcatatctgaagacatgtgaga 155
           |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 287 aaagagacaggtacaaaaagccagatagcaagaagctgtcatatctgaagacatgtgaga 346

                                                                       
Query: 156 catatctcaaacccgtgtcgtaagctcagcacctggcagatcagggaagatttggttaag 215
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 347 catatctcaaacccgtgtcgtaagctcagcacctggcagatcagggaggatttggtcaag 406

                                                                       
Query: 216 gagcaggcatttgccaggcaaagaaagctcatggtc---------agagagtgcagaggt 266
           |||||||||||||||||||||||||||||||||| |         |||||||||||| ||
Sbjct: 407 gagcaggcatttgccaggcaaagaaagctcatgggcagatagaagagagagtgcagaagt 466

                                                                       
Query: 267 gtggcaaggcatagcaagggaagggagcagggcgggctggttgaaacatcattttcaggt 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 467 gtggcaaggcatagcaagggaagggagcagggcgggctggttgaaacatcattttcaagt 526

                                                                       
Query: 327 tgcgatgactttattccaaaggcgatggggagcggtgagaggtggtgtgtcagggttgat 386
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgagatgactttattccaaaggcgatggggagcggtgagaggtggtgtgtcagggttgat 586

                                                                       
Query: 387 atatggagaacagcactgagaaaagttcagtcaaagccaggagaggaatgggctgctggt 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atatggagaacagcactgagaaaagttcagtcaaagccaggagaggaatgggctgctggt 646

                              
Query: 447 gatgaggaagtgatcgttt 465
           |||||||||||||||||||
Sbjct: 647 gatgaggaagtgatcgttt 665


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space:   389025
Effective search space used:   389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)