Query= MSMg01no366_e07.b1 MSMg01no366_e07.b1 CHROMAT_FILE:
MSMg01no366_e07.b1 PHD_FILE: MSMg01no366_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:04 2005
(463 letters)
>mm_chr2_144302954_144303816
Length = 863
Score = 837 bits (433), Expect = 0.0
Identities = 452/463 (97%), Gaps = 8/463 (1%)
Strand = Plus / Minus
Query: 1 gagaaaagcccccttaggctttgcttctcttatctgtttcagtttttcttgcgtctttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gagaaaagcccccttaggctttgcttctcttatctgtttcagtttttcttgcgtctttat 704
Query: 61 tcaaaacatatgctttatgactgctattcattttggttttcttcttctttcaagttaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tcaaaacatatgctttatgactgctattcattttggttttcttcttctttcaagttaact 644
Query: 121 atatgcacttataaaatatgtcactatgtctgttggtacacacctgcagtcttagcactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 atatgcacttataaaatatgtcactatgtctgttggtacacacctgcagtcttagcactt 584
Query: 181 aggaagccgaaacaggaggaccatgaatttgaggctagacaggtctatgataacaagagc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aggaggccgaaacaggaggaccatgaatttgaggctagacaggtctatgataacaagagc 524
Query: 241 ctgtcttataacacaggaactatatgtttttttctgagagcatttttgtattttccataa 300
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 523 ctgtcttaaaacacaggaactatatgtttttttctgagagcatttttatattttccataa 464
Query: 301 gacgcatatatgagaagatactgctccctttcagttttattttatatttgatatatatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gacgcatatatgagaagatactgctccctttcagttttattttatatttgatatatatta 404
Query: 361 taaagctttgttgactttctaaagtttcctgaaggtttctattcactatgctaccacccc 420
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 403 taaagctttgttgactttctaaagtttcctgaaggtttctattc--------accacccc 352
Query: 421 cttcgtgttccacacctttgcctcattgtcttgatcatgaaat 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cttcgtgttccacacctttgcctcattgtcttgatcatgaaat 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_e07.g1 MSMg01no366_e07.g1 CHROMAT_FILE:
MSMg01no366_e07.g1 PHD_FILE: MSMg01no366_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:04 2005
(401 letters)
>mm_chr2_144151539_144152339
Length = 801
Score = 743 bits (384), Expect = 0.0
Identities = 397/402 (98%), Gaps = 3/402 (0%)
Strand = Plus / Plus
Query: 1 acagatatctattcgctggcctcccctcccaagtgctgggattaaagacgcaaaccacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 acagatatctattcgctggcctcccctcccaagtgctgggattaaagacgcaaaccacta 261
Query: 61 cacccagctatgctttcgcttttgaaatagaggtgtgtggttatatatatatatagccga 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 262 cacccagctatgctttagcttttgaaatagaggtgtgtggttatatatatata--gccga 319
Query: 121 tgcttgctaaaccactgtcctcagcctcctgggatctgggattatatgtgtgcacaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgcttgctaaaccactgtcctcagcctcctgggatctgggattatatgtgtgcacaatca 379
Query: 181 caccaaag-gaaaatgaagcattcttcttccttccctaataaacatatccacaaaaccca 239
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caccaaacagaaaatgaagcattcttcttccttccctaataaacatatccacaaaaccca 439
Query: 240 aacagtatgcttgggaaaatctgtctctagggaaatatgcctgctagggtcttagggtgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacagtatgcttgggaaaatctgtctctagggaaatatgcctgctagggtcttagggtgt 499
Query: 300 ggttcaatgggaaagtactcgattagcatgaacaaggcctcaaggccactgtagggggag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggttcaatgggaaagtactcgattagcatgaacaaggcctcaaggccactgtagggggag 559
Query: 360 gcatatgaggaagaggaggagaacgaaacaaaagtctaatta 401
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcatatgaggaagaggaggagaacgaaacaaaagtctaatta 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
