Query= MSMg01no366_h06.b1 MSMg01no366_h06.b1 CHROMAT_FILE:
MSMg01no366_h06.b1 PHD_FILE: MSMg01no366_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:18 2005
(413 letters)
>mm_chr2_146546986_146547797
Length = 812
Score = 745 bits (385), Expect = 0.0
Identities = 391/393 (99%), Gaps = 1/393 (0%)
Strand = Plus / Plus
Query: 21 gggctaaaagaaaccggagtatcaggggggaggggaaggaggcgggttcgaaagaagaac 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gggctaaaagaaaccggagtatcaggggggaggggaaggaggcgggttcgaaagaagaac 280
Query: 81 tccacagcctttcttcagatgggtttaattttgtcacttgagtcaaaattggaaacccgt 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tccacagcctttcttcagatgggtttaattttgtcacttgagtcaaaattggaaacccgt 340
Query: 141 tttctagtacaattgcttctgtgtttagtgagtgttgcagactctttattacaggggaat 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tttctagtacaattgcttctgtgtttagtgagtgttgcagactctttattacaggggaat 400
Query: 201 tttataaacttggcacctcatcatcaagccatcttgggggtcaacttcccacttgtactt 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tttataaacttggcacctcatcatcaagccatcttgggggtcaacttcccacttgtactt 460
Query: 261 ttagctctaaagcaatgtactttataaaagtgtcttctgatttgtaagatttaccataga 320
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttagctctaaagcaa-gtactttataaaagtgtcttctgatttgtaagatttaccataga 519
Query: 321 ttctgagatgagcttccaaacctaatccctcaccgaagtacccatttgcctcttcatgtt 380
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 520 ttctgagatgagcttccaaacctaatccctcaccgaagtacccatttgtctcttcatgtt 579
Query: 381 taaactgctacgttctgttaactcttatcaaat 413
|||||||||||||||||||||||||||||||||
Sbjct: 580 taaactgctacgttctgttaactcttatcaaat 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 812
Length adjustment: 9
Effective length of query: 404
Effective length of database: 803
Effective search space: 324412
Effective search space used: 324412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_h06.g1 MSMg01no366_h06.g1 CHROMAT_FILE:
MSMg01no366_h06.g1 PHD_FILE: MSMg01no366_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:18 2005
(429 letters)
>mm_chr2_146746400_146747228
Length = 829
Score = 830 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Minus
Query: 1 cagactactggcttttgttgagtagtatcacagacaaattttactggagagagccaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cagactactggcttttgttgagtagtatcacagacaaattttactggagagagccaccag 570
Query: 61 ctctgagaactcctgataaaatagttaaatgaagccaacgcaacttgcttgttttgatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctctgagaactcctgataaaatagttaaatgaagccaacgcaacttgcttgttttgatat 510
Query: 121 caaatttcctggccataaatccaagaatgtaaataaaaccacagcaaaaatcagtgccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 caaatttcctggccataaatccaagaatgtaaataaaaccacagcaaaaatcagtgccct 450
Query: 181 gggaaaataaactggttgtgactatctcaagcctgacacccgacggtggaactgctgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gggaaaataaactggttgtgactatctcaagcctgacacccgacggtggaactgctgtat 390
Query: 241 gtgaagccactgtgaagtttgtatacccggttttgtttgctacacaaaaaaaacgattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtgaagccactgtgaagtttgtatacccggttttgtttgctacacaaaaaaaacgattgt 330
Query: 301 agaaaggacaaacacatacatagttaaacagtatttttcttttgacaggctctcttacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agaaaggacaaacacatacatagttaaacagtatttttcttttgacaggctctcttacaa 270
Query: 361 aacctatgttttggtagctacctcatccttattgtacagccccctgggtggtcccttcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aacctatgttttggtagctacctcatccttattgtacagccccctgggtggtcccttcca 210
Query: 421 gggggccac 429
|||||||||
Sbjct: 209 gggggccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
